Citrus sinensis (Valencia orange): 102628367
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Entry
102628367 CDS
T02983
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102628367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102628367
03036 Chromosome and associated proteins [BR:
cit03036
]
102628367
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102628367
Coactivators
SAGA/TFTC/STAGA complex
102628367
Chromosome and associated proteins [BR:
cit03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
102628367
STAGA complex
102628367
TFTC complex
102628367
SAGA complex
102628367
SLIK complex
102628367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
SAM_KIDINS220
Motif
Other DBs
NCBI-GeneID:
102628367
NCBI-ProteinID:
XP_006465927
LinkDB
All DBs
Position
7:join(7305617..7306162,7307102..7307305,7307852..7308430,7308515..7308589,7309008..7309086,7309744..7309808,7309997..7310032,7310121..7310300)
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AA seq
587 aa
AA seq
DB search
MAENNLTTTTSPPKALQSPNPMPDPSSTSSSSSSSTTALVSTQTPATTSFSPSLDSQQQQ
QQQIPQLVQQQQQNNVNTNVMSNYQIPHTLQRSPSISRLNQIHQPQQQQNSQYSSVLRQQ
AIYGQVNFGQQNQQQSSNQQLGSPTLSRSGLIGQTGHLPGMLSGQASAAAAQFNLQSPLM
ASPRQKPGVVPGSQFHPGNSPGQSLPGMQAMGILNLSSHLRANPLYAQQRMNQGQIRQQL
SQQNPLTSPQIQNLSRTSSSLAFMNPQLSGLAQNGQPGMMQNSLSQQQWLKQMPAMSAPG
SPSFRLQQHQRQSPVLLQQQLASSPQLQNSMGLNQQQLSQLVQQQPQMGHAQLHQPQPQP
QPQQQQQLQQQQSQQQPSLHQQQQQQQSPRISGPAGQKSLSLTGSQPDATVSGTTTPGGS
SSQGTEATNQLLGKRKIQDLVSQVDSQGKVDPEVEDLLLEIADDFIDSVTSFACNLAKHR
KSSTLESKDILLHLEKNWHLTVPGFSSEERNHQRKSLSSDVHSKRLEMIRALMEPSQSET
ITNDPREMIRQGLGNPVGVNTHMKSSASSEQLLMPSGSQMLQQLTRY
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaataatttaacaacaacaacatctccgccgaaagccctgcaatctccaaac
ccgatgcctgacccgtcttcgacttcttcatcgtcgtcgtcatcaacaacagcattagtt
tctactcaaacgcccgcaacgacgtcgttttctccttcgctcgattctcaacaacagcag
cagcaacaaatcccacaactcgttcaacagcagcaacaaaacaacgttaacactaatgtt
atgtcaaactatcaaattccgcatactttacaacgatctccctcaatttcgcgccttaac
caaatccaccagccgcagcagcaacagaattctcaatacagtagcgttttgaggcagcag
gcgatatacgggcaagttaatttcgggcagcagaatcagcaacagagtagcaatcagcag
cttggtagtcctactttgtcccggtctgggcttattgggcagactggtcacctgcccggg
atgctgtccggacaagcttctgcggctgctgcacagttcaatttacagtctcccttgatg
gcttcgccacggcagaaacctggggttgtcccaggatcccaattccatcctggcaattct
cctggacagtctttgccggggatgcaagcaatggggatccttaatttaagctcacacttg
agggccaaccctctttatgctcaacagcgaatgaaccaggggcagataaggcaacaattg
tcacaacagaatcccctcacctctcctcagatccaaaacttatctaggacatcatcatct
ctggcatttatgaatcctcagttatctgggctggctcagaacggacagccaggcatgatg
caaaattctctgtcacaacagcagtggttgaagcaaatgcctgcaatgtctgctcctggc
tctccttcattccgtctccaacaacatcagaggcaatccccggtcctcttacagcagcaa
cttgcttcatctcctcaattacagaactctatgggcttgaatcaacagcagttgtcccag
ctggtgcagcagcagccacaaatggggcatgcacagctgcatcagccacagccgcagccg
cagccgcagcagcaacagcaactacaacaacaacaatcgcaacagcaaccaagcttgcat
caacagcagcagcagcagcagtctccaaggatttcaggccccgcaggccagaaatctctt
agtttgacaggatcacagccagatgcaactgtctctggtacaactacacctgggggcagt
tcaagtcaaggaacagaagcaactaatcaactccttgggaagagaaagatacaggatcta
gtttcccaggtggactcccagggaaaggtggatccagaagttgaagatcttcttttggaa
attgctgatgacttcattgactctgtgacttcctttgcctgtaatttggcaaagcatcga
aaatcatcaactttggagtccaaggatatattactgcacttggagaaaaactggcatttg
acggttccaggattttcaagtgaagagcggaatcaccaaaggaaatctttatctagtgac
gtccacagtaagcgtcttgaaatgatacgtgcattgatggaaccctctcagtctgaaacc
atcacaaatgaccctagagagatgataagacagggacttggaaacccagttggtgttaac
acccatatgaaatcttcagcaagttctgagcagctacttatgccatctggatctcaaatg
ttgcagcaactaacacgttattga
DBGET
integrated database retrieval system
