KEGG T02983: 102628650

Citrus sinensis (Valencia orange): 102628650

Entry

102628650         CDS       T02983

Name

(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform

K03456

serine/threonine-protein phosphatase 2A regulatory subunit A

Organism

cit Citrus sinensis (Valencia orange)

Pathway

cit03015

mRNA surveillance pathway

cit04382

Cornified envelope formation

Brite

KEGG Orthology (KO) [BR:cit00001]
09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102628650
09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    102628650
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cit01009]
    102628650
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102628650
   03036 Chromosome and associated proteins [BR:cit03036]
    102628650
Protein phosphatases and associated proteins [BR:cit01009]
Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     102628650
Messenger RNA biogenesis [BR:cit03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     102628650
Chromosome and associated proteins [BR:cit03036]
Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     102628650

SSDB

Motif

Pfam:

HEAT PPP2R1A-like_HEAT HEAT_2 HEAT_EF3_N HEAT_EZ Vac14_Fab1_bd PDS5 Htt_N-HEAT_1 Adaptin_N RTP1_C1 CLASP_N TAF6_C Cnd1 TPR_TNPO3_IPO13_3rd

Other DBs

NCBI-GeneID:

102628650

NCBI-ProteinID:

XP_006484434

LinkDB

Position

4:join(23371001..23371393,23371934..23372180,23373752..23373864,23375031..23375110,23375315..23375456,23375543..23375623,23375895..23375999,23376806..23376988,23377237..23377329,23378318..23378457,23378544..23378610,23378742..23378861)

AA seq 587 aa
MAMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLVDWYIPLVKRLAAGEWFTARVSACGLFHIAYPSAPDILKTELRSIYTQLCQDDMPMVR
RSAASNLGKFAATVEPAHLKTDIMSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPLLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHITPQV
LEMINNPHYLYRMTILRAISLLAPVMGSEITCSRLLPVVINASKDRVPNIKFNVAKVLQS
LIPIVDQSMVEKTIRPCLVELTEDPDVDVRFFATQAIQSIDHVMMSS

NT seq 1764 nt +upstreamnt +downstreamnt
atggcaatggttgatgaaccattatacccaatagccgttctcatagacgagctgaaaaat
gatgacatacagcttaggttgaactcaatacgtaggctgtcaacaattgcacgcgctctt
ggggaggagcggactcggaaggaattaattccatttctgagcgaaaacaatgacgatgat
gatgaggtacttcttgcaatggcagaagagcttggtgttttcattccatatgtgggagga
gttgagcatgcccatgttttgcttccgcctctggagaccctttgtactgttgaggagacc
tgcgtgagggacaaagccgttgagtctttgtgtagaattgggtctcagatgagggagagt
gatttggttgattggtatattcctctggtcaagagactagcggctggtgaatggtttacg
gctcgggtttctgcatgtgggctgtttcacattgcttatccaagtgccccagatatttta
aagacagaattgcggtcaatatacacccaattgtgtcaagatgacatgcccatggttagg
aggtctgctgcatccaatctgggcaaatttgctgcaactgttgaacctgctcatttgaag
acagacatcatgtcaatatttgaggatctgactcaggatgatcaagattctgttcgatta
ttggctgttgagggttgtgcagcacttggaaagctgttggaacctcaggattgtgtagca
catattctccctgttattgtgaatttctctcaggataagtcttggcgtgtgcgctatatg
gttgcaaatcaactgtatgaactttgtgaagctgtgggtcctgagcctactaggacggac
ttggttcctgcatatgtgcgattacttcgagataatgaggctgaagtacgtatagcggct
gctggcaaagtcactaagttctgccgaattttgaatccagaacttgcaattcaacatatt
cttccttgcgttaaggagttgtcatcagattcctcccagcatgtccgctctgctttggct
tcagtaatcatggggatggctccactcctagggaaggatgcaacaattgagcagcttctt
ccaatatttctctctcttttgaaggatgaatttcccgatgtgcgcctcaatatcatcagc
aagcttgatcaagtgaatcaggttattggaattgatctactgtcgcaatccctattacca
gccattgttgagcttgcggaggatagacattggagagttcgtcttgcaataatagagtac
attcctttattggccagtcagttgggcgtaggattctttgatgacaaacttggtgctctt
tgtatgcaatggttacaggataaggtttattctattcgagatgctgctgctaacaacttg
aagcgtcttgctgaagaatttggtccagagtgggcaatgcagcacataactcctcaggtt
ttggagatgattaataatccccactacttgtaccggatgaccattttgcgtgccatctct
ctccttgctcctgtcatgggatcagaaatcacatgttctagactgttgccagtggtcatt
aatgcatcaaaagacagagtacctaacatcaagtttaatgtggcaaaagtgctacagtct
ctcattcccattgttgaccagtctatggtggagaaaacaatccgtccctgtttggttgag
ctcactgaggatcccgatgttgatgtccgtttttttgccactcaagccattcagtcgatt
gatcatgtgatgatgtctagctag

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