KEGG T02983: 102628715

Citrus sinensis (Valencia orange): 102628715

Entry

102628715         CDS       T02983

Name

(RefSeq) DEAD-box ATP-dependent RNA helicase 13

K14805

ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7]

Organism

cit Citrus sinensis (Valencia orange)

Brite

KEGG Orthology (KO) [BR:cit00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cit03009]
    102628715
Enzymes [BR:cit01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     102628715
Ribosome biogenesis [BR:cit03009]
Eukaryotic type
  Pre-60S particles
   Helicases
    102628715

SSDB

Motif

Pfam:

DEAD Helicase_C ResIII Helicase_C_2 AAA_22 Cas3-like_C_2

Other DBs

NCBI-GeneID:

102628715

NCBI-ProteinID:

XP_052289658

LinkDB

Position

9:complement(join(22389136..22389188,22389310..22389391,22389824..22389982,22390733..22390798,22390946..22391086,22391606..22391710,22391998..22392114,22392196..22392318,22394877..22395057,22395796..22396181,22396272..22396448,22397092..22397286,22397371..22397555,22398014..22398286,22398597..22398780))

AA seq 808 aa
MAASSPLLTSEHSKKTKPNRRKRTRKGGEAEKLDSLKWNHSFSAEDNDPFAFLVGSNELD
GGFLSLEEIDEASYNLQIPKPEKGKPGKKLNSKKRKRSSANEEDSGDGDGDGDEDGSGVQ
KQEEKNLKNETGKKKKKKKKGKKIKTVEESVAVSNGPDDAEEELVNEAEISTEFDAWNEL
RLHPLLMKSIYRLQFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPIMQRLLE
EREKAAKMLEDKGEEAEKYAPKGHLRALIITPTRELALQVTDHLKGVAKGINVRVVPIVG
GMSTEKQERLLKARPEVVVGTPGRLWELMSGGEKHLVELHTLSFFVLDEADRMIENGHFR
ELQSIIDMLPMTNGSNKGQSEQTQNCVTVSSLQRKKRQTLVFSATIALSADFRKKLKHGS
LKSKQSVNGLNSIETLSERAGMRANVAIVDLTNMCVLANKLEESFIECKEEDKDAYLYYI
LSVHGQGRTIVFCTSIAALRHISSLLKILGIDVWTLHAQMQQRARLKAIDRFRANEHGIL
VATDVAARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIAIISPNDTSKFVT
LCKSFSKESFQRFPLENSYMPEVMKRMSLARQIDKIMRKDSQEKAKKTWFERNAEAVELV
VDNYDSEEEVVKNRKQKKATSMQLKKLQQELNAMLSRPLQPKTFSRHYLAGAGVSPLLQR
QLEEIAKEKLPDSKSAIENKRRKLVVIGQDCVEPLQALRNAGHEVHMDGKEMAEKRRNLD
SLRRKRKEEKKCLRDQRRKQRKKMKGTE

NT seq 2427 nt +upstreamnt +downstreamnt
atggccgccagttcaccgctgctaacctccgaacattcgaagaagacaaagcccaacagg
agaaaacgaacccgaaagggcggagaagccgaaaagctcgactctctcaaatggaaccac
tctttctcagccgaagacaacgacccttttgccttcctcgttggctccaatgaactcgac
ggaggttttctttcacttgaagagattgatgaagccagttataatttgcaaattccaaaa
cccgagaagggaaagcctgggaagaagctgaattcgaagaaaaggaaacgtagtagtgcc
aatgaggaggattctggtgatggggatggggatggggatgaagatggaagtggagtgcaa
aagcaggaagagaagaatttgaagaatgagacaggaaagaaaaagaagaagaaaaagaag
ggaaagaaaattaagacagttgaggaatctgttgctgttagcaatggtccagatgatgct
gaagaagagttagtcaatgaagctgaaatttcaacagaatttgatgcatggaatgaatta
aggcttcatcctctgcttatgaaatcaatttacaggcttcagttcaaggaaccaacccca
attcagaaagcatgtattcctgctgcagctcatcaagggaaggatgtaattggtgcggct
gagacagggtctggtaaaacgcttgcttttggtttgcccattatgcaacgtctattagaa
gaacgagaaaaagctgcaaagatgctggaagacaaaggggaggaagcagaaaaatatgct
ccaaaagggcatttgagagctcttatcattacccctacgagggaacttgcacttcaggtc
actgatcacttaaagggagttgctaagggtatcaatgttagggtggttcctattgttggt
ggaatgtcaacagagaagcaggaaagacttttaaaagcaaggcctgaggtggttgttgga
actcccgggaggttgtgggaacttatgtcaggaggagaaaaacatcttgttgagttacat
acactgtcgttctttgtgctggatgaggctgatcgaatgattgaaaatggacattttcga
gagttgcagtcaataattgacatgcttcctatgaccaatggctctaataaggggcagtct
gaacaaacacaaaattgtgtaacagtttccagcttgcagagaaagaaaagacaaacactt
gtattttctgcaactatagccttatcagctgattttcgtaagaagctaaagcatggttcg
ctaaaatcgaagcaatcggttaatggattaaattctatagaaactctttctgagcgagca
gggatgagagctaacgtcgctattgttgatttgacgaatatgtgtgtcttggcaaataag
ctggaggagtcatttattgaatgcaaggaagaagataaagatgcctacttgtattacatt
ttgagtgttcatggacaaggccgtacaattgttttctgtacgtccattgcagctttgcgc
catatttcttccctcctgaaaattcttggcatagatgtttggacacttcatgctcagatg
caacagcgagctcgtttgaaggcaattgatcgtttccgtgcgaatgaacatggtatactt
gttgctactgatgttgcagcaagaggccttgatattcctggtgttcgaactgttgttcac
tatcagcttccacattcagcagaagtgtatgttcatagaagtggacgaactgctagagct
tctgctgatgggtgcagtattgctataatatcaccaaatgatacatccaaatttgtcact
ttgtgcaaatcattttctaaggaaagtttccagcgatttccccttgagaactcatacatg
ccagaggtcatgaaacgaatgtctcttgcacgtcaaattgataaaataatgcgaaaagat
tctcaggaaaaagcaaagaaaacctggtttgaacgaaatgcagaagcagtagaattagtt
gtggacaactatgacagtgaggaggaagtagtaaaaaatcgtaagcaaaagaaagcaacc
tccatgcaattgaagaaattacaacaggagctcaatgcaatgctttcacgtccattgcag
ccaaaaacattttcacgtcattatttggcaggggctggtgtatcacctctcctgcagcgt
cagttggaagaaatagctaaagaaaagctgcctgacagcaagagtgcaatagaaaataaa
agaaggaaattggtggttattggtcaagattgtgtggaaccactccaggcactccgaaat
gctggtcatgaggtgcacatggatgggaaggagatggcagaaaaacgaagaaatctggac
agtttgcggagaaaaagaaaagaagagaaaaaatgtcttcgtgatcagcgtagaaagcag
aggaagaaaatgaaaggaactgaatag

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