Citrus sinensis (Valencia orange): 102628798
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Entry
102628798 CDS
T02983
Name
(RefSeq) partner of Y14 and mago isoform X1
KO
K14294
partner of Y14 and mago
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03013
Nucleocytoplasmic transport
cit03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102628798
03015 mRNA surveillance pathway
102628798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102628798
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102628798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
Motif
Other DBs
NCBI-GeneID:
102628798
NCBI-ProteinID:
XP_006491881
LinkDB
All DBs
Position
5:join(11150402..11150593,11151104..11151223,11154570..11154821,11157262..11157405)
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AA seq
235 aa
AA seq
DB search
MGSSNGGGDEELKRMAELSKTLKEGERILAPTRRPDGTLRKPIRIRAGYVPQDEVAIYQS
KGALLRKELTALQEAPPGYDPELDAKPKTKSVKRNERKKEKRQQQAALEKGKIVEKLVDG
EIKTEEVVSAENLSHGSASTDSLTSQMNELSVSANPVVENPLSDAKDPGDAGAPGQDIDK
RIRAIKKKIRLAEAQQQKAGQQELKPEQLEKLSKLEGWHNELKLLEEKKADLEAS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcagtaacggaggaggagacgaggagctgaagagaatggcagaactaagcaaa
accctaaaagaaggagagcgaattttggcccccacgcgtagacccgacggtaccctccga
aaaccaattcggattcgggccggttacgtccctcaagatgaagtcgccatctatcaatct
aaaggtgcactgttgagaaaagaactgacggcattgcaggaggcgccgccaggttatgat
ccagaacttgatgcaaaaccaaagacgaagtctgtaaagagaaatgaaagaaagaaggag
aaacggcaacagcaggctgctcttgaaaagggtaaaattgtggaaaaactggtagatggg
gagattaagacggaagaagttgtatctgctgaaaatctaagtcatgggtcagcatccacc
gactcattgacatctcagatgaatgaactgtctgtttctgcaaatccagttgtcgagaac
cctctgtcagatgccaaggatcctggagatgcaggagctccaggacaagatattgataaa
agaatccgggctattaaaaagaagattcgactcgcggaagctcaacagcaaaaagctggg
caacaagaattgaaaccagagcaattggagaaactgtcaaaactggaaggttggcacaat
gagctaaagcttttggaagaaaaaaaggctgatctggaagcatcatga
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