KEGG T02983: 102628799

Citrus sinensis (Valencia orange): 102628799

Entry

102628799         CDS       T02983

Name

(RefSeq) nuclear cap-binding protein subunit 1

K12882

nuclear cap-binding protein subunit 1

Organism

cit Citrus sinensis (Valencia orange)

Pathway

cit03013

Nucleocytoplasmic transport

cit03015

mRNA surveillance pathway

cit03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:cit00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102628799
  09122 Translation
   03013 Nucleocytoplasmic transport
    102628799
   03015 mRNA surveillance pathway
    102628799
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102628799
   03041 Spliceosome [BR:cit03041]
    102628799
Messenger RNA biogenesis [BR:cit03019]
Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     102628799
Spliceosome [BR:cit03041]
Common components
  Common spliceosomal components
   Cap binding complex
    102628799

SSDB

Motif

Pfam:

MIF4G_like MIF4G_like_2 MIF4G PHTB1_N

Other DBs

NCBI-GeneID:

102628799

NCBI-ProteinID:

XP_015383355

LinkDB

Position

2:complement(join(3625960..3626064,3626745..3626856,3626964..3627142,3627734..3628033,3628662..3629162,3629385..3629523,3630049..3630167,3630360..3630428,3631437..3631521,3632032..3632102,3633056..3633258,3634313..3634379,3636501..3636632,3637299..3637475,3638170..3638232,3639245..3639316,3640686..3640742,3640942..3641001,3641163..3641246))

AA seq 864 aa
MSSWKNLLLKIGDNCPEYGNSDDLKDHIETCFGVIRRELEHSFDDVPHYIINCAEQIPHK
IPLYGTLVGLLNLENEDFVKKVVETTQRKFQDALDSGNCDRIRILMRFLTVMMCSKILQP
GSLVVVFETLLSSAATTVDEDKGNPSWQARADFYVTCILSCLPWGGAELIEQVPEEIERV
MAGLEAYLSIRRHTSDTGLSFFEEDDESGKGLVEKDFLEDLWHRVQALSSNGWKLDSVPR
PHLSFEAQLVSGKSHEFGPISCPEQPDVPTAVSGITHGKQKHDAELKYPQRIRRLNIFPA
SKSEVDMQPIDRFILEEYLLDVLLFFNGCRKECAFYMVNLPVPFRYEYLMAETIFSQLLL
LPQPPFKPIYYTLVIMDLCKALPGAFPAVVAGAVRALFDKIADLDMECRIRFILWFSHHL
SNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPALEELLPP
KGGPNFKYSMEDGRERSEEHALSAELTNKVKGRQTAREIIVWVEESVYPIHGLGVTIKVV
VQTLLDIGSKSFTHLITVLERYGQVISKICPDHDKQLMLIDEVSLFWKNNTQNAAIAIDR
MMGYRLISNLAIVRWVFSPENIDQFHASDRPWEVLRNAVSKTYNRICDLRKEIISLKKGV
TLAEEAAAKAKAELEAAESKLSLVDGEPVLGGNPARLSRLKLHAEKAKNEEISAKESLEA
KEALFARAVEENEALYLSLYRNFSNVLMERLPDASRAGTLQDLKSTHADAMAVDLEEPSA
MELDNEDGRPKKSQSNGGSSGNVYNIGEKEQWCLSTLGYVKAFSRQYASEIWPHMEKLDA
EVLSEDTHPLFRRAVYSGLRRPIN

NT seq 2595 nt +upstreamnt +downstreamnt
atgagcagctggaagaaccttctgcttaaaatcggggacaattgtccggagtacggcaac
tccgacgacttgaaggatcacattgaaacatgcttcggcgtaattcggcgagaactcgag
cactcttttgacgatgttccacattatattattaattgtgctgagcaaattccacacaag
attcctttatatgggacattggttggcttgctgaacttggaaaatgaggactttgttaaa
aaagttgtggagaccactcaaagaaaattccaggatgccttagactctggaaactgcgac
cgcattcgtattttgatgcgatttttgactgttatgatgtgtagcaaaattctccagcct
ggttctctggtggtggtctttgaaactttattgtcatcagctgccacaacagtggatgag
gacaaaggaaatccttcctggcaagcacgtgctgacttttatgtaacttgcattttgtct
tgtctcccatggggaggagcagaactcattgagcaagttcctgaggaaattgagagagtc
atggctggtttggaagcctacttgagcattagaaggcatacttctgacaccggtctgtct
ttctttgaggaagatgatgaatctgggaaaggtcttgttgaaaaggatttcttggaagat
ttgtggcatcgagtacaagctttatcaagcaatggatggaagctagatagtgttccaagg
ccccacctttcatttgaagctcagctggtttctggaaagtctcatgaatttgggcccata
agctgtcctgagcaacctgatgtacccacagcagtttctggaataacacatggtaaacaa
aagcatgatgcagagttgaagtatcctcaaaggatacgcaggcttaatatatttccagca
agcaaaagtgaggtggatatgcaacctattgatcgcttcattttggaagaatatttgctg
gatgtgcttttgttcttcaatggctgtcgaaaggagtgtgctttttacatggtaaacttg
cctgtgcctttccgatatgagtatctgatggctgagacaatcttctcccagttgctatta
ttacctcaacccccattcaagccaatatattacacgctggttattatggatctctgtaag
gcacttcctggggccttccctgcagttgttgctggtgctgttcgtgctctttttgacaaa
attgctgatttggatatggagtgccggatacggttcattctttggttttcacaccaccta
tcaaattttcaattcatttggccttgggaagaatgggcttatgtcttagaccttcctaaa
tgggctccacaacgagtgtttgttcaggaggtcttggaaagagaagtccgcctgtcttac
tgggacaaagttaagcagagcattgagaatgcacctgctttagaagagttgcttcctccc
aaaggtggtccaaacttcaaatatagtatggaagatggtagagaaagaagcgaagaacat
gcactctctgcggaactgacaaacaaggtgaaaggaaggcaaactgcccgggaaataatt
gtgtgggtagaagaaagtgtgtatcctattcatgggctgggagtcaccatcaaagtggtt
gtgcaaacactacttgatattggatctaaaagtttcactcatttgatcactgtattggag
agatacgggcaagtcatatcaaaaatatgccctgatcatgataagcaattgatgctgata
gacgaagtgagtttgttttggaagaacaatacccagaatgcagccatagcaattgataga
atgatgggttatcggcttatatctaatttggccattgtgagatgggtcttctctccagaa
aacattgaccaatttcatgcttcagatcgtccatgggaggtccttaggaatgcagttagc
aagacatataatcgtatctgtgatctaaggaaagagattatatctcttaagaagggtgtt
acattagcagaagaagctgcagctaaggccaaagcagagttagaagctgctgagtcaaag
ctttctttagttgatggtgaacctgttcttggtggaaatcctgcaaggttgagtcgtctg
aaattacatgccgaaaaagctaaaaacgaggagatatcagcaaaagagtctttagaggcc
aaggaggctctttttgctcgagctgtagaagaaaatgaggcactatatctttctctttac
agaaacttctcaaatgtgttgatggaacgcctaccagatgcatctagagctggaactttg
caagatttaaaatctacccatgcagatgcaatggctgttgatcttgaagagccatcggca
atggaactggacaatgaggatggaagacctaaaaagagtcagtcaaatggtgggagctca
ggcaatgtctacaacataggtgaaaaggagcagtggtgtctatcaactctgggttatgtg
aaggccttttcaagacaatatgcttctgagatatggccacatatggagaagctggatgca
gaggtattaagtgaagatacacatcctcttttccgcagagcagtttattctggtctacgc
cgacccatcaactag

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