KEGG T02983: 102629316

Citrus sinensis (Valencia orange): 102629316

Entry

102629316         CDS       T02983

Name

(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD1

K12489

Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein

Organism

cit Citrus sinensis (Valencia orange)

Pathway

cit04144

Endocytosis

Brite

KEGG Orthology (KO) [BR:cit00001]
09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102629316
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cit04131]
    102629316
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cit04147]
    102629316
Membrane trafficking [BR:cit04131]
Endocytosis
  Arf GTPases and associated proteins
   Arf associated proteins
    102629316
Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    102629316
Exosome [BR:cit04147]
Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102629316

SSDB

Motif

Pfam:

BAR_3 ArfGap Ank Ank_3 PH Ank_2 BAR Ank_5 Ank_4 PH_11 PH_8 PH_20 ANK_LRRK2 BAR_2 PH_13

Other DBs

NCBI-GeneID:

102629316

NCBI-ProteinID:

XP_024957219

LinkDB

Position

4:complement(join(17483387..17483501,17485273..17485763,17486662..17486755,17486829..17486974,17487202..17487540,17487624..17487710,17487870..17488097,17488197..17488328,17488417..17488632,17489211..17489252,17489343..17489438,17489534..17489581,17489695..17489760,17490506..17490550,17492565..17492627,17493561..17493631,17494118..17494218,17495186..17495262,17495637..17495681))

AA seq 833 aa
MQFTKLDDSPMFRQQIQCMEETDEALRGRCLKFYKGCRKYTEGLGEGYDGDIAFVSALES
FGGGHNDPICVALGGPVMTKFTIALREIGTYKEVLRSKVEDMLNERLLHFVNVDLQDVKE
ARKRFDKASLIYDQAREKFLSLRKSTRMDVAVVIEDDLHNARTSFEQARFNLVGALSNVE
AKKRFELLEAVGGTMDAHLRFFKQGYELLHQMEPFINQVLAYAQQSRECSDYEQASLHQR
MQDYLKQIDRESRQCLNGSLGSPSGDDVKPFPRNSNKLIEAAMQSAVKGKVQTIKQGYLS
KRSSNLRADWKRRFFVLDSRGLLYYYRKPWSWNSAAGSQSAIQRSNPSETSQGLLSRWLS
SHYHGGVHDEKSVARHTVNLLTSTIKPDADQSDLRFCFRIISPTKVYTLQAENTLDQMDW
IEKINGVIASLLSFQTPERCLSSGPKESFDRCFIRESGLLVDSPYVDQTTIEEHASKNIT
GGDHLHSSKSLGDLEYIVKNEKPIDLLRRVYGNNKCADCGASEPDWASLNLGVLICIQCS
GVHRNLGVHISKVRSLTLDVKVWEPSVLNLFQSLGNIYANSVWEELLRIGNNSLTDERHM
GFSRTDKQKRFIVRKPNPDDSISVKEQYIHAKYAEKIFVHKRKDHHHLLSVAQQLWESVR
DNDKKAVYRHIICSEPNVNAIHGQASYGKRLPLATVMEMEEHERDDKKIDCFDGDTLDDP
LSYLNSMHRSGDELIEEASDGCSLLHLACLNADIGMVELLLQYGAKINVSDSRGRTPLHH
CIISRKPAIAKLLLARGADPHAIDEDGNTAHKLISKSDLRDNEIVTLLTSTNG

NT seq 2502 nt +upstreamnt +downstreamnt
atgcagttcacgaaacttgacgattctcctatgtttcggcaacagatacaatgtatggag
gagactgatgaagcattgcgagggagatgtttaaagttttacaaagggtgtcgcaagtac
acagaagggcttggagaggggtacgatggcgatattgcttttgtaagtgctcttgaaagt
ttcggtggtggccataatgatcctatttgtgttgctcttggtggccctgtcatgaccaaa
ttcacaattgctttgagagaaatcggtacatacaaagaagttcttcgatcaaaggtagag
gatatgctgaatgaaaggttactgcattttgtcaatgttgatctgcaggatgttaaggag
gcccgaaaacgttttgacaaggcttcccttatatatgatcaggcacgtgagaagtttctt
tcattgaggaagagcacaaggatggatgtagctgttgtcatagaggacgatcttcacaat
gcaagaacctcatttgagcaagctcgcttcaatctggttggtgctctctctaatgttgaa
gcgaaaaagaggtttgagttgttggaggctgttggtgggacaatggatgctcaccttcga
ttcttcaaacagggatatgagctgctacatcagatggagccatttattaaccaggttctg
gcttatgcacagcaatcaagagaatgttctgactatgagcaggcatctcttcatcaaagg
atgcaggactatcttaagcagattgatcgagaaagtaggcaatgtttaaatggttctctt
ggttctcctagtggagacgatgtaaaaccttttccaaggaattcaaataaattgatagag
gcagctatgcaatctgctgtgaaaggaaaggttcaaaccattaaacaagggtatctctca
aaacgatcatcaaatttgagagctgactggaaaagaagattttttgtacttgatagtcga
gggctgttgtactattaccgtaaaccttggagctggaattcagcagctgggagtcagtct
gctatacagagaagtaatccctctgaaactagtcaggggttgctgagtcgatggctttct
tcccattaccacggtggtgtacatgatgaaaaatctgttgcacgtcacactgtgaatctt
ttgacctccacaattaagcccgatgctgatcagtcagatttaagattctgtttcaggatc
atctctccaacaaaagtatatactttgcaggcagagaatactctggaccaaatggactgg
atcgaaaaaataaatggagtaattgcttccctactaagtttccaaacacctgagaggtgt
ctttcttctggtcctaaagaaagctttgatcgttgcttcatccgtgaaagtggcctcttg
gtggattccccttatgttgatcagacaacaattgaggaacatgcatctaaaaacattacc
ggtggagatcatttgcattcatcaaaaagtttgggtgacctggaatatattgttaagaat
gagaagccaattgatttgttaagaagagtatacgggaataacaagtgtgctgattgtggt
gcatctgaaccagattgggcatccctaaacctcggtgttcttatatgtattcaatgctct
ggtgttcatcgtaatcttggagttcatatatcaaaagtgagatcactgacacttgatgtt
aaagtgtgggaaccatctgtcctaaatttgtttcagtcactgggaaatatctatgcaaac
tcagtctgggaggagttgttgcgtattggaaataattccttaactgatgagaggcatatg
ggcttttcgaggactgacaaacagaaacggtttattgtgagaaaacccaatcctgatgat
tccatttcagtaaaagagcagtatattcatgcaaagtatgctgagaaaatttttgttcat
aagagaaaggaccatcaccaccttctttcagtggcacagcagttgtgggaaagtgtccgt
gataatgacaagaaagcagtttaccgccatataatctgctctgaaccaaatgtcaatgcc
atccatgggcaagcttcatatggtaaacgcttgcctttggccactgtgatggaaatggaa
gagcatgaaagggatgataaaaaaattgattgctttgatggtgacactttggatgatcct
ttgagctatttgaactcaatgcatagaagtggagatgagctcatagaagaggcttctgat
ggctgttcactgcttcaccttgcatgtttaaatgctgacattggcatggtggagcttctc
ctacagtatggtgcaaaaataaatgtttctgattcaagaggtagaacgccgctgcatcat
tgtattatcagcaggaaacccgcaattgcgaaactgctacttgcaaggggagctgatcca
catgccatagatgaagatggtaatactgcacataagctcatatcaaaatctgacctccgt
gacaatgagattgtcactctcttaactagcacaaatggatga

DBGET integrated database retrieval system