Citrus sinensis (Valencia orange): 102629412
Help
Entry
102629412 CDS
T02983
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cit03000
]
102629412
04121 Ubiquitin system [BR:
cit04121
]
102629412
Transcription factors [BR:
cit03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
102629412
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
102629412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
102629412
NCBI-ProteinID:
XP_006485798
LinkDB
All DBs
Position
3:10008249..10011557
Genome browser
AA seq
1102 aa
AA seq
DB search
MSSDRRDGTRNPARSARQEWVPRGSPARVVNPPPQSINPNTMNGVVENSRNMPTPDDNQH
SRNMPTPDDNQHSRNIAPRVQNGQFTNHHRGRARGENQDKKLPKDLDLPQLLQEIQDKLM
KSKVECMICYDMVKRSAPIWSCSSCFSIFHLSCIKKWARAPTSADLSAERSQGFNWRCPG
CQSVQLTSSKEIRYVCFCGKRTDPTSDFYLTPHSCGEPCGKPLESKISSAGGSEEDLCPH
KCVLQCHPGPCPPCKAFAPPRLCPCGKKMITTRCFDRKSVLTCGQHCNKHLECWRHKCEK
ICHVGPCGPCRVLVNASCFCKKKVEVVLCGDMAVKGEVKAEAGVFSCSSTCGKKLSCGHH
SCGEICHPGPCGDCELLPSKIKSCFCGKMSLQEQRKSCLDPIPACSEKCGKPLACGLHYC
DELCHAGNCPPCLAAVTQKCRCGSTSRNVECYRTTGGENFTCEKACGRKKNCGRHRCSER
CCPLSSSNSLLSGDWDPHFCQMACGKKLRCGQHSCESLCHSGHCPPCLETIFTDLTCACG
RTSFPPPLPCGTPPPSCQLPCSVPQPCGHSASHSCHFGDCPPCSVPIAKECIGGHVVLRN
VPCGSKDIRCNKLCGKTRQCGMHACGRTCHPPPCDTACNSEPGSKASCGQVCGAPRRDCR
HTCTALCHPSALCPDVRCEFPVTINCSCGRITASVPCDAGGSSSGYSSDTVYEASIVQKL
PAPLQPVESTGKKIPLGQRKLMCDDECAKLERKRVLADAFEITTPNLDALHFGESAVTEL
LADLYRRDPKWVLSVEERCKFLVLGKNRGSTNALKVHVFCPMLKDKRDAVRLIAERWKLA
VNPAGWEPKRFIVVHVTPKSKPPPRVIGVKGATTVNAPHAPVFDPLVDMDPRLVVSFLDL
PRESDISALVLRFGGECELVWLNDKNALAVFSDPARAATATRRLDHGSVYYGAVVVQNVG
APSTANAWGGPGTVKEVGAALSSQRGNPWKKAVVQEMAWREDSWGEEESSAGSGDVQASA
WKNKEAPIVASINRWSVLDSETLSYSSPVSIRTEEPAKQSASQSNKGGESNASSVNVAGQ
PASSFSETELSEVVDDWEKAYD
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgatagaagggatgggactagaaatcctgcccgaagcgcccgccaggaatgg
gtcccacgaggatccccagctagagttgtgaatccaccacctcagagcatcaatccgaat
acgatgaatggtgtggttgaaaatagcagaaatatgcccactccggatgataatcaacat
agcagaaatatgcccactccggatgataatcaacatagcagaaacattgcccctagagtt
caaaatgggcaattcacaaatcatcacagggggagggcaaggggtgagaatcaggataag
aagctaccaaaggacctggatttgccacagcttttgcaagagattcaagacaagctcatg
aaaagtaaagtggagtgtatgatctgttatgatatggttaagaggtctgcaccaatatgg
tcttgttcgagttgtttctcgatttttcatctgagttgcatcaagaaatgggcacgtgca
cccacatctgctgatttgtcagcagaaaggagtcaaggctttaactggcgctgcccgggt
tgtcaatctgtgcagctcacatcatcaaaggagattcgatatgtttgtttctgtgggaag
aggacagacccaacttctgatttttatttgactccgcattcatgtggagaaccctgtggt
aagccacttgagagtaagatttccagtgctggtgggagtgaggaggatctttgtcctcac
aaatgtgtcttgcagtgccatcctggtccatgtcctccttgtaaggcatttgctccacca
cgtttgtgtccgtgtggaaagaaaatgattacaactagatgctttgatcggaagtctgtt
ctaacgtgtggtcagcactgcaataagcatcttgaatgttggcgtcacaaatgcgagaag
atatgccatgtaggtccttgtggtccttgtcgggttcttgtcaatgcctcatgtttctgc
aagaaaaaggtggaggttgtactttgtggagacatggctgtaaagggggaggtgaaagca
gaagctggagttttttcatgtagttcaacttgtggaaaaaagcttagttgtggtcatcat
agctgtggagaaatttgccatcctggtccttgtggagattgtgaattgttgccaagcaag
atcaagtcttgtttctgtggaaagatgagcttgcaggagcaaaggaagagttgtttggac
ccaattccagcttgttcagagaaatgtggcaaaccacttgcttgtgggctgcactattgt
gatgagttgtgccatgctgggaactgtcctccttgtttagctgcagtcacccaaaagtgt
cgttgtggatcaacttcccgaaatgtagaatgctacagaacaacagggggtgagaatttc
acctgtgagaaagcttgtggacgaaagaagaattgcgggaggcaccggtgtagtgagcgg
tgctgccctctctctagctctaacagccttctctccggagattgggatccacacttttgt
caaatggcttgtggaaagaagctgaggtgtggacagcattcctgtgaatcactgtgtcac
agtggccattgtcctccttgccttgaaacaatctttactgatttgacatgtgcctgtggg
agaacttcatttccacctccattgccttgtggtacacctcctccttcatgtcagctccca
tgctccgttcctcagccctgtggccattcagcttctcacagttgccattttggggactgc
ccaccttgttctgtgcctatagcaaaggagtgcattggggggcacgtggttttgaggaat
gtaccttgtggctcaaaggatattagatgtaacaagctctgtggcaagacgaggcaatgt
ggtatgcatgcatgtggcagaacttgtcacccgcctccttgtgatactgcctgcaattct
gaaccaggctcaaaggcttcttgtgggcaggtgtgtggtgctccaaggagggattgccgg
catacatgtactgcactatgccatccgtctgctctttgtcctgatgtaagatgcgaattc
cctgtcacaatcaattgttcttgcggccggattacagcaagtgttccctgtgatgctgga
gggagcagttctggttatagttctgataccgtttatgaagcctccattgtccagaagttg
ccagcaccacttcaacccgtggaatcgacaggcaagaaaattcccctagggcagaggaag
cttatgtgtgatgatgaatgtgctaagttggagcgtaaacgggttcttgcggatgctttt
gaaatcactaccccaaatttggatgcacttcattttggagagagtgctgtgactgagttg
cttgctgatctttataggcgtgatccaaagtgggtgctctctgtggaggaaagatgcaaa
ttcttggtgctcggcaagaacagagggtctacaaatgctcttaaggttcatgttttctgt
ccaatgctgaaggataagagggatgcagtaaggctgatagctgagagatggaagctagct
gtcaatcctgctgggtgggagccaaagcgttttattgtggttcatgttacacccaagtcc
aagcctccacctcgggtgattggggttaagggtgccaccactgtaaacgctcctcatgcg
ccagtgtttgatccactagtagatatggatcccaggcttgttgtttcctttctagatttg
cctagggagtcagatataagtgctcttgtattgagatttggaggggaatgtgaactggtt
tggttgaacgacaagaacgcattggctgtatttagtgatcctgcacgagcagcaactgct
acaaggagattggatcatggatcagtttattatggagctgttgtggtccagaatgttggt
gcaccttcgactgctaatgcatggggaggacctggaactgtcaaggaagtgggagcagcc
ctttcttcccagagaggaaatccgtggaaaaaggctgtagttcaagagatggcttggaga
gaagattcatggggtgaagaagagtcttctgctggttctggagatgtgcaggcgtctgcc
tggaaaaataaagaagctccaattgtggcatcaataaaccggtggagtgtcctggactct
gaaacattgtcttattcatctcctgtatctattagaactgaagaacctgcaaaacagtca
gcaagtcaatccaataaagggggtgaatcaaatgcaagcagtgtgaatgtggcagggcag
cctgcttcaagttttagtgaaacggagctgtcagaagtggttgatgactgggagaaggct
tatgattag
DBGET
integrated database retrieval system
