Citrus sinensis (Valencia orange): 102629496
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Entry
102629496 CDS
T02983
Name
(RefSeq) NF-X1-type zinc finger protein NFXL2
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cit04121
]
102629496
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
102629496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
102629496
NCBI-ProteinID:
XP_006486315
LinkDB
All DBs
Position
4:join(1163156..1164289,1164738..1164851,1164932..1164987,1165374..1165440,1165568..1165660,1165884..1165969,1166079..1166241,1166339..1166512,1166701..1166891,1167083..1167164,1167304..1167507,1167723..1167812,1167909..1168067)
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AA seq
870 aa
AA seq
DB search
MTSSANYQQILSDSDTDSDNGRTESFPDLSSSILKPYLESTNQSSLATSQSPSELSKIKS
FLASSSSGALSCLICLERIKPSDPTWHCSTLCYSIFHLICIQSWARQSSDLSASLAASRL
PITAEKAAESSTWNCPKCRSQYSKSQIPKKYLCFCGKLEDPYSEDPWILPHSCNEICNRP
LQNNCGHFCLLLCHPGPCPPCPKLVNSSCFCRKFQEVRRCGFKSFSCNKICSKPLDCRTH
KCLQICHEGPCPPCKARAVYMCRCGRVEEERECCERDFRCENACGKALDCGKHVCERGCH
VGQCGGCPLPGKRTCPCGKRVYEGMSCDVAVPLCGATCDKMLSCRIHRCHDRCHRGPCIG
TCRMVIAKLCRCRSLKKEVPCYQDLVCERKCQRMRDCGRHACKRRCCNGDCPPCSEICGK
RLLCKNHKCPSPCHRGACAPCPLMVTISCACGETQFEVPCGTEKDQKPPKCRKSCHVIPL
CRHRSICKPHKCHYGACPPCRLLCEEEYPCGHSCKLSCHGPRPPPNPEFTLKTKKKKSNH
QSEVTPGSPCPPCPELIWRSCVGEHIGAERMMVCSDRTQFSCDNLCGNPLPCGNHYCTKY
CHALKSQSSLSVETRSAESCEVCSLPCQKERLPTCPHSCPLPCHPGVCPSCKVLVKRSCH
CGSMVHVFECIYFNTLSEKEQMAARSCGGPCHRKLPYCTHLCPEICHPGQCPLPEQCCKK
VTVRCGCQTLKKEWQCLDVQAAYRNIGRDPKDISKNQFGLGLLRCNCDCKSKVQVVDSVL
QSRKPKVEEKEPATEKHVGKRRKRRECVRVVNQASRLQRIFTAVKWLLLFVTLLVAVAAG
LYYGYKGLLKLSDWMNEVEEQRQRKRFPRI
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgacctcctccgctaattaccaacaaatattatcggactccgacacagactccgacaac
ggccgcaccgaatcattccccgatctctcgagctccattctcaaaccctacctagaatcc
accaaccaatcatcactcgccacgtcacaatcaccatcagaactctcaaaaatcaaatcg
ttcctcgcctcatcctcctccggcgccctatcatgcctcatatgcctcgaacgcatcaag
ccctccgatccgacgtggcactgctccactctttgctactctatcttccacttaatctgc
atccagtcgtgggcccgccaatcctccgatctatccgcctccctcgccgcctcccgcctc
ccaatcaccgccgaaaaagctgccgaatcctccacctggaactgccctaaatgccgatct
cagtactcgaaatctcaaatccctaagaaatatctttgcttttgcggcaaattggaggat
ccgtacagtgaagatccctggattttgccgcattcttgtaacgaaatatgcaacagaccg
ttgcaaaacaactgcggtcacttttgtttattgttatgtcatccaggtccctgccccccc
tgccccaagttagttaactcatcttgcttctgccgcaagtttcaagaagttcgtcgctgc
ggattcaaatcgttttcgtgtaacaaaatttgttcgaaacctttagattgtaggactcat
aagtgtttacaaatttgccatgaggggccttgccctccttgtaaagcacgggcggtgtac
atgtgccggtgtgggagagttgaagaagagagggagtgttgtgagagggattttaggtgt
gagaatgcttgtgggaaagctcttgattgtgggaagcatgtgtgcgagagaggttgtcat
gttggacagtgtggagggtgtccacttccggggaagaggacttgtccttgcgggaagagg
gtgtatgagggaatgtcatgtgatgttgctgtgccgttgtgtggggccacttgtgataag
atgttgagctgtaggattcataggtgccatgatcgatgccaccgaggaccttgtattggg
acttgtaggatggtcattgctaagttgtgtcggtgtaggagcttgaagaaagaggttcca
tgttatcaagatttggtgtgtgaacggaagtgtcaaagaatgagagattgtgggcggcat
gcttgtaaacgccgttgctgtaatggggactgcccgccgtgttcagagatttgtggcaag
aggcttctgtgtaagaaccacaaatgcccatcaccatgccatcgaggtgcctgtgccccc
tgccctctgatggtgactatttcatgtgcatgtggggaaacacagtttgaggttccatgt
ggtaccgagaaggatcaaaagcctcctaaatgtcgaaaatcatgccatgtaattccttta
tgcaggcacagatcaatttgcaagcctcacaaatgtcattatggagcttgtcccccatgc
cggctactttgtgaagaagaatatccttgtggtcattcgtgcaaattaagctgccatggc
cctaggcctcctcctaacccagaattcacattaaaaacaaagaaaaagaaatcaaatcat
cagagtgaagttactcctggttctccatgccctccttgcccagagcttatttggagatca
tgtgttggtgagcacattggagcagagaggatgatggtttgctcggatagaacacaattt
tcctgtgataacttgtgtggaaatcctcttccttgtggcaatcactattgtacaaaatat
tgccatgccctgaaaagccaatcttcattatcagttgaaacgagaagtgctgaatcttgt
gaagtgtgttctcttccttgccagaaggagagattgcctacttgtccacattcttgcccc
ttgccctgtcatccgggagtatgtccttcctgcaaagttcttgtaaaacgatcttgtcat
tgtggctcaatggtgcatgtctttgagtgcatatatttcaatactctatcggaaaaggag
caaatggctgctcgctcgtgtggtgggccctgtcataggaaattaccctattgtacacat
ctctgtccagaaatatgtcatcctggtcaatgcccattgcctgaacagtgctgcaaaaag
gttactgttcgttgtggatgccaaacattgaagaaggagtggcagtgtctagacgttcaa
gcagcttatcgcaatatcggtcgtgatcccaaagatatatctaaaaatcagtttggtctt
ggacttctgcgttgcaattgtgattgcaagagtaaagtacaggttgttgattcagtgtta
cagtcacgtaaacctaaagtggaggaaaaggagccagctacagagaagcatgtaggcaag
cgtaggaaaaggcgtgaatgtgttcgagtagtgaatcaagcctcaagactgcagaggatt
ttcaccgccgttaagtggctgcttctgttcgtcactcttttggtagctgtggctgcaggt
ttatattatgggtacaagggtctcttgaagctgtctgattggatgaatgaagttgaggag
cagagacagagaaaaagatttccccgtatctaa
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