Citrus sinensis (Valencia orange): 102629596
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Entry
102629596 CDS
T02983
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102629596
Enzymes [BR:
cit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102629596
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
102629596
NCBI-ProteinID:
XP_006484000
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All DBs
Position
4:join(25864669..25864775,25864931..25865671,25865778..25865916,25866056..25866277)
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AA seq
402 aa
AA seq
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MAIPLLLWLLLCLLAPTFISSSPVQDPELVVEEVHKSINASRRNLGFLSCGTGNPIDDCW
RCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEP
LWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKR
GGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN
NYMTHHNKVMLLGHSDTFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
MYALGGSASPTINSQGNRFVAPNDRFNKEVTKYEDAPESEWKNWNWRSEGDLMVNGAFFT
PSGAGASSSYAKASSLGARPSSLISSITAGAGSLNCRKGKPC
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcaattccactcttgctttggttgctcttgtgccttttagctccaaccttcatttcc
tcttcaccagttcaagatcctgaattagtagtggaagaagtacacaaaagcatcaatgcg
tctaggaggaatttggggtttctgtcgtgtgggaccggcaatccgatcgacgactgctgg
cggtgtgacccgaagtgggaagagaaccggcagcagctagcggattgcgccatcgggttc
ggcaagcaggccattggtgggaaagatggtaagatatatgttgttacggactccggtgac
gatgacccagtgaacccaaagccaggcactctgaggtatgctgtgatccaagacgagccc
ctatggatcattttcgcacgtgacatggtgatcacattgaaagaggagttgatcatgaac
tcgttcaagaccatcgacggccgaggagcgagcgtacacatagccggtggtccatgcatt
actatccagtacgtgaccaacatcattattcatgggattaatatacatgactgtaagaga
ggaggcaacgctaacgtgcgggactcaccaagtcactacgggtggaggactatatcggac
ggcgatggtgtatccatctttggtggaagccacgtgtgggttgatcattgctctttgtct
aattgcaacgatgggttgatcgatgccattcatggatccacagccatcacaatctcaaac
aattacatgacccaccataacaaagtgatgcttctgggccacagtgatacttttactcag
gacaagaacatgcaagtcacgattgctttcaatcactttggtgaagggcttgtgcaaagg
atgcctagatgtagacatgggtattttcatgtagtgaacaacgactacacacattgggag
atgtatgcgctcggtgggagtgcttctcctacaattaacagccaagggaatagatttgtt
gctccaaatgatagattcaacaaagaggtgactaaatatgaggatgcgccggagagtgaa
tggaagaattggaattggaggtccgaaggggatttgatggtaaatggtgcattttttacg
ccatcgggtgccggcgcatcttctagttatgctaaggcttcaagtttaggagcaagacca
tcttcactaataagttcaatcacagcaggagcgggctcgcttaattgcaggaaaggcaag
ccttgctag
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