Citrus sinensis (Valencia orange): 102629658
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Entry
102629658 CDS
T02983
Name
(RefSeq) zinc finger protein SHOOT GRAVITROPISM 5-like
KO
K25871
zinc finger protein IDD14/15/16
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cit03000
]
102629658
Transcription factors [BR:
cit03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
102629658
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_6
zf-C2H2_4
CHAT
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
102629658
NCBI-ProteinID:
XP_006494619
LinkDB
All DBs
Position
3:join(21346365..21346476,21346601..21347000,21347626..21348463)
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AA seq
449 aa
AA seq
DB search
MLANNSPSAIPCSSEPFSCLENGISHNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCE
ICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGI
KKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQD
ACSKGHIRSEQQGLQQQPAACLSRTASSPSPSSDTNFSASHWPNLMVPKVPTIDTMFLNR
FHQGDKSTRNVKHHNLELQLLTTSNPIDVSDDSPKRDHDHNHSTQLQLSIGSSDISEKNE
LNVTYLSSTTNGKPAMDIASRLKEQAREQLRLAMAEKACAEEARQAAKRQIELAEQEFAN
AKRIRQQAQAELDKAQALKEHAIKQINSTILRVTCHACKQQFQSRLPPDENSLVLSYMSS
ATTEGEVNNRNNRTNHRLAKTVNLSNKSL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgttggctaataattctccttccgctataccgtgctcttcagagcctttttcgtgttta
gaaaatggtattagccataataaaaggaaaagaagaccagcaggaactccagatccagat
gcagaagtggtttctctttcgccaaaaacactactggaatcggatcgttacgtgtgcgag
atctgtaaccaggggtttcagagagaccaaaacctgcaaatgcaccgacggcgacataaa
gttccttggaaacttctcaaacgagagacccccgttgtaaggaagcgcgtttttgtatgc
cctgagcctagttgcttgcaccatgacccttgccatgcgcttggtgatttggtaggtatc
aagaagcacttccggagaaagcacagcaatcacaagcaatgggtttgtgaaaagtgctct
aaaggctatgctgttcagtccgattacaaggcgcatcttaaaacttgtggtacccgtggt
cattcttgcgattgtggccgcgttttttcaagagttgagagtttcattgaacaccaagat
gcttgtagtaagggacatatccgatcagagcagcaagggctgcagcagcagccagcagct
tgtttatcgcgaaccgcttctagcccaagcccctccagtgataccaattttagcgcatct
cactggcctaatttgatggtaccaaaggtgccaacaattgataccatgttcttgaatcgt
tttcatcaaggagataagtccactagaaatgtgaaacatcacaatttggagcttcaactc
ttgactacgtcaaatcccattgatgtttcagatgattcccctaagagagatcatgatcat
aatcattctactcagttgcagctctcaattgggtcatcggatatcagcgagaaaaatgaa
ttgaatgttacttatttgagtagcactacaaatggaaaaccagcaatggacatagcatca
aggctaaaagaacaagcacgcgagcagttaaggttagccatggctgaaaaggcctgtgct
gaagaggcaagacaagcagcaaaaaggcagattgaattggctgaacaagagtttgctaat
gccaagagaattaggcaacaagcacaagctgaactggacaaggctcaggctttaaaagag
catgcaatcaagcaaatcaattcaactattctgcgagtcacttgtcatgcttgcaaacaa
cagttccagtcacgattgcctcccgatgagaactctctggttttgagttacatgtcttct
gctacaaccgaaggtgaagtaaacaaccgtaataatcgaactaatcatcgtcttgcaaaa
actgttaacctttcaaacaaatccctctag
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