Citrus sinensis (Valencia orange): 102629932
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Entry
102629932 CDS
T02983
Name
(RefSeq) transcription factor ALC-like isoform X1
KO
K28361
transcription factor SPT/ALC
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
102629932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cit03000
]
102629932
Transcription factors [BR:
cit03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
102629932
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
CENPU
bHLH_LHW
Rit1_C
Ribosomal_S20p
Motif
Other DBs
NCBI-GeneID:
102629932
NCBI-ProteinID:
XP_006473301
LinkDB
All DBs
Position
5:join(35672832..35673077,35673189..35673290,35673406..35673471,35673590..35673655,35674705..35675025,35675106..35675186)
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AA seq
293 aa
AA seq
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MADLYGTTPPTAGHEPEEISSFLNQFIHNSSSSSSSCFFAQPEDRHPFGRSADPSVLDSS
SAGLNFSNLVVGAVDSDTNDSEKGPDALEVPSNDTVRTKTSSKRSRAAEVHNLSEKRRRS
RINEKLKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTMRNGLSLHPMWLPGVLP
SMQLPQTGMVFDEGNGLLNTNGGTETFSANEESSVQTGFNLSSQCTISNQPVALPSAANI
STSETAFGLEPLIQAHYGPFTLPPSSKEICSEGAPHLHLDMNFNGKNSSSGVS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggccgatctgtacggaacaacgccgccaactgccggccacgaaccagaagaaatctct
tcatttttaaaccaatttatacacaattcgtcgtcgtcgtcgtcttcttgttttttcgct
cagccggaggatcgccaccctttcggccgatcggctgacccctctgttcttgactcttct
tctgctggtctcaatttctctaatttggttgtcggtgccgtggactccgatacgaatgat
agtgagaagggtcctgatgcattggaggtgccatcgaacgacacggttcgaactaaaacg
tcgtctaaaaggagcagggctgcagaagttcataatttgtcagaaaagaggcggaggagt
agaattaatgagaaactgaaagctctacagaacctaattcccaattctaacaagactgac
aaagcttcaatgctggatgaggctattgaatatctgaagcagcttcaacttcaagtacag
atgttaacaatgagaaatggattgagtttgcacccaatgtggttaccaggagtactacca
tctatgcaactgcctcagacgggaatggtatttgatgagggtaatggactgttgaacacc
aatggaggaaccgaaacattttctgcaaatgaagaaagctcggtgcaaactggttttaat
ctttccagccaatgtaccatctctaatcagccagttgccttaccttcagcagcaaatatt
agcacatcagaaactgcatttggacttgaaccactgattcaggctcactatggacccttc
actctccccccttcttccaaggaaatctgcagtgaaggtgcacctcatctgcatttggat
atgaatttcaatggaaaaaactcctcgtctggcgtgtcgtag
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