Citrus sinensis (Valencia orange): 102629995
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Entry
102629995 CDS
T02983
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
102629995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cit04121
]
102629995
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
102629995
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
LRR_6
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
102629995
NCBI-ProteinID:
XP_006467903
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All DBs
Position
2:complement(join(29351051..29351806,29352273..29352765,29354209..29354717))
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AA seq
585 aa
AA seq
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MESESKRKKESPNTAELAVTASFPDEVLEIVLSLLTSHRDRSSVSLVCKDWYRAERWSRT
QVFIGNCYSVSPEILTRRFPNIRSVTLKGKPRFSDFNLVPPNWGADIHAWLVAFAVKYPF
LEELRLKRMAVSDESLEFLASNFPNFKLLSLLSCDGFSTDGLAAIATHCKNLTELDIQEN
GIEDSSGSWLSCFPESFTSLEVLNFANLTSEVNTDALERLVSRCKSLKVLKVNKSISLEQ
LQRLLVRAPQLEELGTGSFLQDLTARPYADLESAFNNCKNIHTLSGLWEAVPLYLPALYN
SCANLTFLNLSYTALQSGEFAKLVVHCPRLRRLWVLDTVEDKGLEAVGSNCPLLEELRVF
PADPFDEEIIHGVTEEGFVAVSFGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCI
MTPGLPDYLTNEPMDEAFGAVVKTCSKLQRLSVSGLLTDLTFEYIGKYAKNLETLSVAFA
GRSDRGMQCVLEGCPKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRL
AKQMPRLNVEVMKEDGSDDSQADKVYIYRTVAGPRRDAPPSVLTL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgaatcgaaacggaaaaaggaatctccaaacacggccgagttagccgtgacg
gcgtcgtttccggacgaagtactggagatagtgctgtctctcttaacttcgcacagagat
cggagctccgtctctttagtttgcaaggactggtaccgcgcggaacggtggtcaaggact
caagtatttatcggcaactgctactctgtttccccggagattctcacgcgcaggttccct
aatattcggagcgtgacgttgaaggggaagccgagattctcggatttcaatttggttcca
cctaattggggcgccgatattcacgcttggcttgtggcgtttgctgttaagtatcctttt
cttgaagagctgaggctgaagagaatggctgttagtgatgagagtttggaattcttggct
tctaattttcccaatttcaagcttctttcgcttttgagctgcgatggcttcagtactgat
ggtcttgctgcgattgctacgcattgcaagaatttgactgagcttgacatccaagagaac
ggtatagaagatagcagtggaagttggttaagctgtttccctgaaagctttacatcattg
gaagtactgaattttgctaatcttactagtgaagttaatactgatgcacttgagagactt
gtaagcaggtgcaaatcattgaaggtgttgaaggttaacaaaagcatttctttggaacaa
ttgcaaaggctgcttgttcgtgctcctcaattagaggagcttggtactggctcattcttg
caagatctcactgctcgcccgtatgcagatttagagagtgcatttaacaattgcaaaaat
atacataccctctctggcttgtgggaagcagtaccattatatctcccagctctatacaat
tcttgtgcaaatttgacgttcttgaacttaagctacactgcattgcaaagtggtgaattt
gccaagctcgttgtgcactgtccccgtcttaggcgcctttgggtcctggacacagtcgaa
gacaaagggctagaagctgttggttctaattgtcccttgcttgaggaactccgtgttttc
ccggctgatccctttgacgaggaaatcatccatggggttactgaagaagggtttgttgct
gtttcttttggctgtcggagactccactatgttctttacttttgtcggcagatgaccaat
gctgctgtggcaacaattgtgcagaattgccccaatttcacccacttccgtctctgcata
atgactccaggactacctgattacctgaccaatgaacccatggatgaggcttttggtgca
gtggtgaagacttgcagtaaactccaacgactttcagtttcaggtctcttaactgacctg
acatttgagtacattggaaagtatgccaaaaatttggaaaccctttcagtagcttttgct
gggaggagtgatagggggatgcagtgtgtgcttgaaggctgtccaaagctaaggaaactt
gagataagggattgcccatttgggaatgaagcactgctgtcaggtttggagaagtacgaa
tctatgagatcactttggatgtcagcctgcaatgtgacgatgaatgcctgtaggcgattg
gcaaagcagatgcccaggttgaatgttgaggtgatgaaggaagatggaagtgatgacagt
caagctgataaggtttacatatatcgaactgttgctgggccaagaagggatgcccctcca
tctgtgctcactctctga
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