Citrus sinensis (Valencia orange): 102630009
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Entry
102630009 CDS
T02983
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102630009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102630009
03036 Chromosome and associated proteins [BR:
cit03036
]
102630009
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102630009
Chromosome and associated proteins [BR:
cit03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102630009
PBAF complex
102630009
GBAF(ncBAF) complex
102630009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
102630009
NCBI-ProteinID:
XP_006470052
LinkDB
All DBs
Position
2:complement(join(9939828..9939900,9940397..9941961))
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AA seq
545 aa
AA seq
DB search
MSANNNNPAKSLGQTSSPFANAGMGSPSMPMNPGFPQSQAQAQMGAGFPSQFQLSQAQAL
AQAHQSKMHAQVAQAQAAHAQLQAHLQAQGLSINQFQNAGIGNLGSSSPSNLTPGNASLK
RMPQKPPVRPPVVPMSNMVSPLKAMELTSAARRKKQKLPEKQLQERVAAILPESALYTQL
LEFEARVDAALTRKKVDIQEALKNPPCLQKTLRIYVFNTFANQIKTIPKKPNAEPPMWTL
KIIGRILEDGVDPDQPGMVQKSNPLYPKFSSFFKRVTISLDQRLYPDNHIIVWENSRSPA
PHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSPPLMEVLGIEVDTRPRIIAAIWHYVKA
RKLQHPNDPSIFTCDPPLQKVFGEEKMKFTMVSQKISQHLSPPQPIHLEHKIKLSGNSPV
GTACYDVLVDVPFPIQRELSTLLANADKNKEIDQCDEAICSAIRKIHEHRRRRAFFLGFS
QSPVEFINTLIESQSKDLKLVAGEGSRSAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSD
APGST
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgaacaacaataaccctgccaagagtcttgggcaaacttcgtcaccctttgct
aatgctggaatgggtagtccatctatgcccatgaaccctggttttccgcaatcacaagct
caggcgcaaatgggtgctgggtttccgagccagtttcagttatctcaagctcaggctcta
gcccaggcacatcagtcaaaaatgcatgctcaggtggcgcaagcccaagcagctcatgcc
cagctccaagctcatttacaagctcaagggctttccattaaccaattccagaatgctggt
attggaaacttaggttcatcttcaccttctaatttgactcctggtaatgcaagtctgaaa
aggatgcctcagaagccccctgttcgtccacctgtggttccaatgtcaaacatggtttcg
ccattaaaagcaatggaacttacgtctgctgcacgaaggaagaagcaaaaacttccagag
aaacagttacaagaaagagtggctgcaattttgcccgaatctgccttgtatacccagctc
cttgagtttgaggctcgtgttgatgctgccttgactagaaagaaagttgatatccaggag
gcacttaagaatcccccttgtttgcagaaaacccttcggatttatgttttcaatacattt
gctaatcagattaaaactattccgaagaagccgaatgccgagccacctatgtggacgctt
aagataattgggaggatcttggaagatggtgtagatccagaccagcctggaatggtacag
aagtctaatcccttgtacccgaagttctcatctttcttcaagagagttaccatttcccta
gaccagagactctaccctgataatcatatcattgtatgggagaattcccgatccccagca
cctcatgagggttttgaagtaaagagaaaaggagataaagagtttaccgtaaacattcgg
ttggaaatgaattatgtgcctgagaaatttaagctgtctcctcccttgatggaggttctt
ggtattgaggttgatacacggccgagaattatagcggcaatttggcattatgtgaaggct
agaaaattgcagcacccaaatgatccttccatctttacttgtgatccacctcttcaaaaa
gtatttggggaagaaaagatgaaattcactatggtttcacagaagatatcacaacattta
tctcctccacaacccatacatttggagcacaagatcaagctttcaggtaatagtccagtt
ggaacagcatgctatgatgtgttggttgatgtgccattcccaatacagagggaattgtct
actctattggccaatgctgataagaacaaagagattgatcagtgtgatgaagcaatatgc
tctgctataaggaagatccatgaacaccgaagaaggagagcgttctttctagggttcagt
caatctcctgtggaatttattaacacattgattgagtctcaaagcaaggatttgaagctt
gtggctggagaaggtagtcgaagtgctgagaaagagcgccgatcagatttcttcaaccaa
ccatgggttgaagatgctgtgattcgttatttgaaccgtaagccagctgccggaagtgat
gctcctggaagcacatag
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integrated database retrieval system
