KEGG T02983: 102630160

Citrus sinensis (Valencia orange): 102630160

Entry

102630160         CDS       T02983

Name

(RefSeq) protein argonaute MEL1-like isoform X1

K11593

eukaryotic translation initiation factor 2C

Organism

cit Citrus sinensis (Valencia orange)

Brite

KEGG Orthology (KO) [BR:cit00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102630160
   03036 Chromosome and associated proteins [BR:cit03036]
    102630160
Messenger RNA biogenesis [BR:cit03019]
Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102630160
Chromosome and associated proteins [BR:cit03036]
Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    102630160
   RNA interference (RNAi) pathway
    RITS (RNA-induced transcriptional silencing) complex
     102630160
   microRNA pathway
    RISC loading complex
     102630160

SSDB

Motif

Pfam:

Piwi ArgoN PAZ ArgoL1 ArgoL2 ArgoMid StiP

Other DBs

NCBI-GeneID:

102630160

NCBI-ProteinID:

XP_024955648

LinkDB

Position

6:complement(join(20891166..20891347,20891446..20891477,20891630..20891724,20891809..20891882,20891952..20892078,20892511..20892574,20892666..20892728,20892806..20892948,20893024..20893161,20893246..20893367,20893464..20893614,20893695..20893814,20893924..20893995,20894085..20894192,20894335..20894451,20894540..20894675,20895010..20895110,20895254..20895375,20895539..20895669,20895774..20895923,20896117..20896322,20897848..20898144))

AA seq 916 aa
MYGRGSRNGGQGSSSSSAPASRLSSELEQRLVLQPRPPNTPQPPPPAVQAKPVAAASSSK
VVTVKFPPRPSYGTAGTRCLIRANHFLVELTGRDLYHYDVSITPEVTSRGLNRAVMKELL
EKHGKTHFNGCLPAYDGRKGFYTAGALPFTSKDFNIKLIDRDESGDIKREREFKVSVKLA
SRADINHLRQFLQCKSREAPHDIIQVLDVVLRESPSKNCTVVGRSFFAPGFHKSEIGFGV
ECWKGFYQSLRPTQMGMSLNMDVSATAFYEPISVVDFVAKYLNLGDPRRAASKTFSESDQ
IKLKKALRGVKVEVAHGESKRYRVSGITSQPTKKLNFLVEDKREKLVIEYFQERYNISLR
YASWPALQSGNEPKPIYLPMELCKIVEGQKYSKKLNDRQVTALLREACRRPREREESIRR
IAENNNYENDKLAKEFGVHVKKELVCIDAHVLPPPVIKYNDYGRDRTIRPRMGQWNMINA
KMYNGAKVNCWTCLNFSSLSTQIASGFCHDLVSMCRNKGMDVNPNPIYPVQSSHPNQIER
ALSDVHRACNDQRKALQLLIIILPDLSGNYGRIKRVCETELGIVSQCCQPKHARKCSPQY
LENVALKINVKTGGRNSVLEDAIARNIPVLTDIPTIIFGADVSHPQPGEDSSPSIAAVVA
SMDWPAVTTYRGLVSAQQHREEIIQDLFTVQQDPTRGPVNAGMIRELLIAFKRTTNEKPK
RIIFYRDGVSEGQFSHVLLSEMDAIRKACQSLEESYLPPVTFIVVQKRHHTRFFPTNPSQ
TDKSGNIQPGTVVDRMICHPLEFDFYLCSHAGIQGTSRPVHYHVLFDENKFTADNLQKLT
NNLCYTYARCTRSVSVVPPAYYAHLAAFRARYYIEGEGAGAADAGPGKGAAVRGEAASVR
PLPPLSPNIKDVMFFC

NT seq 2751 nt +upstreamnt +downstreamnt
atgtacggaagaggaagtcgtaatggtggtcaaggttcgagctcatcgtcggctcccgcg
agccgtctgagctccgagctggaacaacgccttgttctccaacctcgaccaccgaacaca
cctcagccaccgccgccggctgttcaagcaaagccagtggcagcggcttcttcttccaaa
gtcgttactgtgaagttcccgccaaggccaagctacggcacggcgggaactcgttgcctc
attagagccaaccacttcttggttgagctcacaggccgtgacctctaccactatgatgtt
tcgatcactcctgaagttacatcaagaggacttaacagagctgtaatgaaagagctgctg
gagaagcatggaaaaacgcacttcaatggctgcttacctgcatatgatggcaggaaagga
ttttacactgctggtgctttgcccttcacctcaaaggacttcaatattaagttgattgac
agagatgaaagtggagatattaagagggagagggagttcaaggtcagtgtcaagctggct
tctagagctgacattaatcacttgagacagtttctgcagtgcaaatcaagggaggcaccc
catgatataatacaagttcttgacgtggtccttagggaatctccttccaagaattgcaca
gtcgttggaaggtcgtttttcgctcctggcttccacaaatctgaaattggttttggtgtc
gaatgctggaaaggattctatcagagccttcgcccaacccaaatgggaatgtctctaaat
atggatgtgtctgccacagccttttatgaacctatttcagttgtcgactttgtggcaaag
tatctcaatcttggagatccaagaagagcagcctcaaagactttctcagagagtgatcaa
ataaagctaaagaaggccttgagaggagtaaaagtagaagttgctcatggagaatcaaag
cgttaccgagtttctggcattacatctcaacctacaaaaaagctgaattttttggttgaa
gataaaagagagaagcttgttatagaatatttccaagagagatacaatatttcacttcgt
tatgcttcatggccggcacttcaatctggaaatgagcccaagcccatttatttgccaatg
gagctgtgcaagattgttgaagggcagaaatactcaaaaaagttaaatgacaggcaggtt
acagccctgttaagagaggcctgcaggcgacctagagagagggaagagagtattcgaagg
attgcggagaataacaactatgaaaatgacaagttagctaaagaatttggagtccatgtg
aagaaggaattggtatgcattgacgctcatgtgcttccaccccctgtgattaagtacaat
gattatggaagagatagaacgatcaggccacgtatggggcagtggaacatgatcaatgca
aaaatgtataatggtgctaaagtgaattgctggacttgcttgaacttctccagtttgagt
acacaaatcgcttctggcttttgccatgatcttgtttccatgtgccgcaacaaaggaatg
gatgtgaacccaaatcctatatatcctgtccagtccagtcatccaaatcagatagagaga
gcattatcagatgttcaccgtgcatgcaatgatcaaagaaaagcactgcagttgttaatt
atcatccttcctgatctcagtggaaattatggcagaattaaaagagtgtgtgaaactgag
cttggaatagtttctcagtgctgtcagcccaagcatgctaggaagtgtagcccacagtac
ctggaaaacgtggccttgaagattaatgtgaagactgggggcagaaattctgtgttggag
gatgcgattgccaggaacatacctgttctgactgacatccccaccataatctttggtgct
gatgtaagccatccgcaaccaggagaggattctagcccttcaatagcagcagttgtggca
tcaatggattggccagcagttaccacctacaggggcctggtttctgcccagcaacataga
gaggagatcattcaagatctttttacggtgcaacaggatcctacaagaggaccagtcaat
gctgggatgatcagggaactgctgattgctttcaaaagaacaacaaatgaaaagccaaaa
aggataatcttctacagagatggtgtgagcgaaggccagtttagtcacgtgctgctcagt
gagatggatgccattcgaaaggcctgccaatctctggaggagtcataccttccaccagtt
accttcattgtggtgcagaagaggcatcacacacgcttcttcccaacaaatccttcccaa
acagacaagagcggcaacatccaacctggaactgtcgtcgacagaatgatatgccaccct
ttagagttcgacttctacctctgcagccacgctgggattcagggaacaagcaggccagtc
cattatcatgttctctttgatgagaacaaatttacggctgacaacttgcagaagctaacc
aacaatctttgctatacttatgcaagatgcaccagatctgtctcagtagttccgccagca
tactatgctcaccttgcagctttcagagcaagatattacatcgagggagaaggagccggt
gcagctgatgctgggcctggaaagggagctgccgttcgaggggaagctgcttctgttaga
cctctgcctcctctgagccccaacatcaaggatgttatgttcttttgttag

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