KEGG   Citrus sinensis (Valencia orange): 102630227
Entry
102630227         CDS       T02983                                 
Name
(RefSeq) chaperonin CPN60-1, mitochondrial-like isoform X4
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102630227
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102630227
   03110 Chaperones and folding catalysts [BR:cit03110]
    102630227
   03029 Mitochondrial biogenesis [BR:cit03029]
    102630227
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cit04147]
    102630227
Enzymes [BR:cit01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     102630227
Messenger RNA biogenesis [BR:cit03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     102630227
Chaperones and folding catalysts [BR:cit03110]
 Heat shock proteins
  HSP60 / Chaperonin
   102630227
Mitochondrial biogenesis [BR:cit03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    102630227
Exosome [BR:cit04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102630227
  Exosomal proteins of other body fluids (saliva and urine)
   102630227
  Exosomal proteins of breast cancer cells
   102630227
  Exosomal proteins of colorectal cancer cells
   102630227
  Exosomal proteins of bladder cancer cells
   102630227
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 102630227
NCBI-ProteinID: XP_006495000
LinkDB
Position
2:complement(join(17077733..17077760,17077838..17077916,17078026..17078128,17078531..17078634,17078727..17078826,17078944..17079027,17079119..17079196,17079322..17079390,17079478..17079558,17080075..17080161,17080248..17080337,17080482..17080586,17080758..17080853,17081057..17081229,17081332..17081389,17081471..17081498,17081588..17081625))
AA seq 466 aa
MFRFACSLASRVRLINTTGTQSVCCTWSRNYGAEDTKRFIDCTKYESVLVKALNDEAFKA
LGRANLTGLTQGFRMAADAVVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFE
KGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKI
SNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKA
IMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCE
QLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGI
VPGSGVALLYALKELDKLQTTNSDQKIGVQIVQNALKMAAYLIASNAGVDGSVIDKLLEQ
DSSDLGYNPARGNFVDMFKCGDVDPLKHVPSEFAKATSMISLKNAI
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgttccggtttgcttgtagcctcgcctccagggtcaggttgattaataccaccggcacc
cagtcggtttgttgtacttggagcagaaattatggcgctgaagacactaaaagatttatt
gattgcaccaaatatgagagtgttcttgtcaaagccctgaatgatgaagctttcaaggca
cttggaagagcgaatctcacaggcctaacacaagggtttagaatggctgctgatgcagtc
gtgagaaacttggactgccaagcacgaaagatcaccacatttgaagaaattgcccaggtt
ggaacaacagcagccaatggtgacggagagattggcgagcttatagccaaggtttttgag
aagggttgggaaaatgatcttattactatctttgacaggaaagctctctataatgaatta
aattttgttaagggaatgaaactagagtggggtcttaaatccccatacttcttcacccat
aagaataaaaaagaatgtgttttagacggtgcattggttttgatctatgacacaaaaatt
tcaaactccaatgttatcaggcaagcaagtttgccatgtatgatgcagggacaaagctta
ttggttgttgctgaagatgttgaaaatgaagttctaggagatattgcgacagacttcacc
tgtactactgaaaaggtttgtatcatcaaagctgctggattggcagaagataggaaggcc
atcatggaggaccttgcaattctcacaggaggccaggttttaactggaggctcaggtatg
aactctacgtattttgtgcctctaaagcttggctcatgcaaaagggttatagcaacaatg
gataatgttgttatcattggtgggtctggtgaattggtagacattcaagaaagatgtgaa
cagctgagatctacaataaaattgagcacttcggacaagttgaaagatcgccttgcaaaa
ctttctggtggatatgccgttttgaaggtttgtggacatggtaaagctgaagtgcgtgaa
aagaagcttaaaattactaatgccttgcatgctgtccaggctgcaaaggaagaaggaatt
gtgcctggtagtggtgttgcactactatatgccttgaaggagctggacaaattgcaaacc
acaaattcagatcagaagattggtgttcaaattgtccagaatgctcttaagatggctgca
tacttgattgcttctaatgctggagttgatggttctgtaattgacaagctattggagcag
gacagttcagaccttggatacaatccagctagaggaaattttgtagatatgttcaagtgt
ggggatgtcgatccactgaaacatgtaccatcagaatttgcaaaggccacaagtatgatt
tcattgaagaatgcaatctag

DBGET integrated database retrieval system