Citrus sinensis (Valencia orange): 102630291
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Entry
102630291 CDS
T02983
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
102630291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cit04121
]
102630291
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102630291
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
LRR_4
F-box_5
LRR_At5g56370
LRR_6
F-box-like
LRR_8
Alpha-mann_mid
Motif
Other DBs
NCBI-GeneID:
102630291
NCBI-ProteinID:
XP_024950359
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All DBs
Position
2:complement(join(29346182..29346937,29347043..29347535,29348235..29348725))
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AA seq
579 aa
AA seq
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MEEERQRKDQNTSEVDSVKQAITKVLALLTSHKDHNSASLVCKDWYEAEQLSRTHVFIGN
CYAVSPEILTRRFPNILSVTLKGKPRFSDFNLVPQDWGADIHPWLVAFADRYPSLEELRL
KRMSVSDESLEFLAVSFPNFKVLSLSSCDGFSTDGLAAIATNCKNLTELDIQENGIEDIS
GSWLSCFPESFTSLEVLNFANVNSEVDFDALEKLVSRCKSLKDLKVNKSISLEQLQKLLV
LAPQLVDLGTGSFSQELTDDQRAELESAFNKCKNIHKLSGLWQATALYFPALSPVCANLT
FLNLSYATLGSSELVKLLMHCPLLKRLWVLDTVEDRGLEAVGSSCPLLEELRVFPADPFD
EEITYGVTEAGFLAVSHGCPRLQYVLYFCQAMTNAAVATIVRNCPNFTCFRLCIMNPGQP
DYVTNEPMDEAFGAVVRTCTNLQRLSLSGLLTDLTFEYIGQYAKNLELLSVAFAGSSDWG
MQCVLRGCPKLRKFEIRDCPFGDAALLSGLDKCESMRSLWMSACNVTMDGCKLLASKKPR
LNVEVIKEAESDDNQADKVYVYRTVAGPRKDAPPSVITL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaaagacagagaaaagaccaaaacacatcagaagtagacagtgtcaagcaa
gccattacaaaagtactggcgctcttgacttcccataaagatcacaactccgcctccctg
gtctgcaaagattggtacgaggcagaacagttgtcgagaactcacgtattcatcgggaac
tgctatgcggtctcacccgagattctaacgcgccggtttcctaacattctgagcgtgacg
ctgaaagggaagccgagattctcggatttcaatttggttccacaagactggggcgccgat
attcacccatggctggtagcgtttgctgacaggtatccgtcgcttgaggagttgaggctg
aagagaatgagtgtcagtgatgagagtttggagttcttggctgtcagttttcccaatttc
aaggttctttcgctttccagttgtgatggattcagtactgatggtcttgctgctattgct
actaactgcaagaatttgactgagcttgacattcaggagaatggtattgaggatataagt
ggaagctggctgagctgcttccctgaaagcttcacatcattggaagtactcaactttgcc
aatgtgaactctgaagttgattttgatgcacttgagaaactcgtaagcaggtgcaagtca
ttgaaagatttgaaagtcaacaaaagtatttccttggagcaattacaaaagctacttgtt
cttgctcctcaactagtagaccttggtaccggttcattctcgcaagaactaactgacgac
cagcgcgctgagctggagagtgcattcaataagtgcaagaatatacataagctctcaggt
ttatggcaagcaacggcattgtattttccagctttatctcctgtttgtgcaaatttgaca
ttcttgaatttgagctatgcgactttggggagtagtgaacttgtcaagcttcttatgcat
tgccctcttcttaagcggctctgggtgctggacacagtagaagacagaggactggaggca
gtaggttccagttgtccattgcttgaagaactccgcgttttccccgctgatccctttgat
gaggaaattacttacggggttacagaagcagggtttttagcagtgtcccatggctgtccg
agacttcagtacgttctgtacttttgtcaggcgatgaccaatgctgctgtggcaacaatt
gtgcggaactgccccaatttcacctgcttccgcctttgtataatgaatccgggacagcca
gattacgtgacaaatgaacccatggatgaggcctttggtgcggtggtgaggacttgtacc
aaccttcaaaggctttcactttcaggcctcttaacagaccttacatttgagtacattggc
cagtatgccaaaaatttggaactcctgtcggtagcttttgctgggagcagtgattggggt
atgcaatgtgtgctaagaggttgtccaaagctgaggaaatttgagataagggattgccca
tttggggacgcagctctactctcaggattggacaagtgtgaatcaatgaggtcactttgg
atgtcagcatgcaatgtgacaatggatggttgtaagttattggcaagcaaaaagccaagg
ttgaatgttgaggtgattaaggaagccgagagtgatgacaatcaagctgacaaggtttat
gtttaccgcactgttgctggaccaagaaaggatgccccgccttctgtaatcaccctgtaa
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