KEGG   Citrus sinensis (Valencia orange): 102630295
Entry
102630295         CDS       T02983                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic isoform X1
  KO
K17600  vacuolar protein sorting-associated protein 54
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cit01009]
    102630295
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cit04131]
    102630295
Protein phosphatases and associated proteins [BR:cit01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     102630295
Membrane trafficking [BR:cit04131]
 Endosome - Golgi transport
  Tethering complex
   GARP complex
    102630295
SSDB
Motif
Pfam: Vps54 Vps54_N EXOC6_Sec15_N
Other DBs
NCBI-GeneID: 102630295
NCBI-ProteinID: XP_006468383
LinkDB
Position
2:join(27472598..27473398,27473796..27473858,27474088..27474167,27474509..27474626,27475612..27475689,27475867..27476023,27476159..27476247,27476789..27477045,27477749..27477920,27478009..27478092,27478172..27478593,27478907..27479060,27479616..27479697,27480527..27480606,27481056..27481217,27481403..27481470,27481559..27481639,27481739..27481874)
AA seq 1027 aa
MDSLPSHSGRSHVDSPTTTTKTPPSYAKSISDAGSQSLSSILNNPNVGKSGVYGSDASWV
GWWSSSIAVSPLEFAPLIPKSTSELNRSDFQTYLSSISDSYHRFEDIRKHASKESVDVEN
IGGQGEALVACLREVPALYFKEDFSLSEGATFRAACPFSNVTENIVLQEKLSQYLDVVEL
HLVKEISLRSNSFFEAQGQLQDLNVKIVEGCSQIRELKETIRLLDTDLVDSARQIQELNA
TRSNLLALQQKLKLILDVNQALSTLKLLVASGDCAGALDVTDDLQHLLDGDELTGLHCFR
HLRDHVAASIDSINSILSAEFMRAAIHDAGDTDVAIISKAKARASISLNGKDDEQVTVDD
EETSNFRDHLLPLIIGLLRTAKLPSVLRIYRDTLTADMKMAIKTAVAELLPVLVARPLES
DFSPGERAVDADGGGSSLASKLRSLSSESFVQLLGAIFTIVRAHLMRAAEVKKAIEWIMC
NLDDHYAADSVAAAIAIGAAAAETAQDNHIQSGSLLPYSPLRSGAKIPSFQGKATDATSP
SNMSKNFRADVLRENTEAVFAACDAAHGRWAKLLGVRVLLHPRLRLQEFLSIYNITQEFI
TATEKIGGRLGYSIRGTLQSQAKAFVDFQHESRMTKIKAVLDQETWVEVDVPDEFQAIVT
SLVCSEAVVTGSTDDVQGNLMTNDNEVATSNNSTLQAQSGQESAQQQIDRTDSSEILEQN
MAQIQPTSSTEGNERNKADASSSSVQSNNNNIERGKSTSQTLIYGGVGYHMVNCGLILLK
MLSEYIDMNHFLPALSSEVVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSITAKHLALA
SQVISFTYAIIPAIRQILFQKVPETRKPLLLSEIDRVAQDYKVHRDEIHTKLIQIMRERL
LHHLRQLPQIVETWNRPDDGDAQPSQFARSLTKEVSYLQRILSRTLHEVDVHAIFRQVVI
IFHSIISESFSHLDISTPQAKERLYREIKHILACIRSLPSDKSSDSATPNWGQLDEFLEQ
RFGADAG
NT seq 3084 nt   +upstreamnt  +downstreamnt
atggattcactaccttcccattcgggaaggtcacatgttgattctccaaccactactacc
aagacgccgccgtcttacgcgaaatcaatctctgatgccggtagccaaagcctctcttcg
atacttaacaaccctaacgtcggcaaatccggcgtctacgggagcgacgcctcttgggtc
ggctggtggtcttcctctatcgccgtttcccctctcgaattcgcgccgttgattccgaaa
tccacctccgaactcaatcgatccgacttccaaacctatttgtcctccatatccgattcg
tatcaccgattcgaggacatccgaaagcacgccagcaaagagagcgtggacgttgagaac
attggggggcaaggtgaggctttagttgcgtgcttacgcgaggtccccgcactttatttc
aaagaagatttctctctatcagagggtgctacgtttcgtgcggcgtgccctttctctaac
gtgactgagaacattgtcttgcaagagaagctgtcacagtacttggacgttgttgagtta
catctggtgaaggagatttcattgcgatcaaattccttttttgaggctcaggggcagtta
caggacttgaatgtgaagattgtggaggggtgtagtcagatacgggaattaaaggagacg
atcaggcttttggatactgatttggtggattctgcacgtcagattcaggagttaaatgct
acgaggagtaatttattggctctgcaacagaaattgaagcttattttagatgttaatcaa
gctttatccacccttaaattgcttgttgcatctggagactgtgctggagccttggatgtc
acggatgatttgcaacatctactggatggggatgagctcactggcttacattgctttcgt
catcttcgggatcatgtagcagcttcaatagattctattaacagcattctttcagcagag
tttatgcgtgctgcaatacacgatgctggggatacagatgtggctattatatcgaaagca
aaagcgagggcatctatttctttgaatggaaaggatgatgaacaggttacagtagatgac
gaagaaacatctaatttccgtgatcatcttcttcctctcatcattgggttgctcaggacg
gctaagctcccttctgttttgagaatatatcgcgacacacttactgctgatatgaaaatg
gctattaagactgccgtggcagagctccttcctgttcttgttgctcgacctctggagtca
gatttctcacctggagaacgtgcagtggatgcagatggtgggggctcatcacttgcgagc
aagttgagaagcctgtcatcagaaagctttgttcaactattgggtgctatcttcacgatt
gtgcgggctcatttaatgcgggctgctgaagtgaaaaaggctattgagtggattatgtgc
aaccttgatgatcattacgctgctgattcagttgctgctgcaattgcaattggtgctgca
gctgcagaaacagcacaggacaatcatattcaaagtggttcgcttctgccatattcacct
ttaagaagtggtgcaaagattccttcatttcagggaaaagcaactgatgcaacaagtccc
tcaaatatgtccaagaatttcagagccgatgtattaagagaaaacactgaagccgttttt
gctgcatgcgatgctgctcatggaagatgggcaaagcttcttggggtccgtgtacttctg
catcctaggttgaggttgcaggaatttttaagcatatacaatatcacacaagagtttata
accgcaacagagaagattggtggaaggttgggatatagcattcgtggaacattgcagtca
caagccaaagcctttgttgacttccagcatgaatcccgaatgacaaaaattaaggcagtt
cttgaccaagaaacatgggtggaagtagatgttcctgatgagtttcaggccattgttact
tcactagtttgctctgaagcagttgttacggggagtacagatgatgtccaaggtaatttg
atgacgaacgacaatgaagtggccacaagcaacaatagtacacttcaagctcaaagtgga
caagaaagtgctcaacagcagattgatcggacagactctagcgaaatccttgagcaaaat
atggcccaaatacaacctacatcttcaaccgagggaaatgaaagaaataaagccgatgct
tcatcttcctctgtccaaagtaacaataataacattgaacgtggaaaatctacctctcaa
acccttatctatggaggtgttggttatcacatggtaaactgtggcttaatattgctgaag
atgttatcagagtacattgatatgaatcattttttgccagctctatcttcggaagttgtt
catcgtgttgtggagatattaaaatttttcaataccaggacttgtcagcttgttctcggt
gctggtgccatgcaggtgtctggtttgaagtccattactgctaaacacctggccttggca
agtcaagtaatcagcttcacatatgcaattattcctgcaatcaggcaaattctctttcag
aaagtacctgagacacgaaagccattgttgctatcagagattgatcgagtagctcaggat
tacaaggttcaccgagatgaaattcatacaaagctgattcaaataatgagagaaaggctg
ttgcaccacctgcgacagttgcctcagatagtagagacctggaacagaccagatgatggg
gatgcacaacccagtcaatttgctcgatcgctaacgaaggaagtgagctaccttcaacgt
attttatctcgaactttacacgaggttgatgttcatgcaattttcaggcaagttgtcata
atcttccattcaataatttcagagtcattttctcacttggacattagtactccacaagca
aaagagaggttgtatcgggaaattaaacacattcttgcatgcattcgatcattgccctcg
gataagtcaagcgattctgcaacccccaactgggggcagcttgatgaattcttggaacaa
agatttggagctgatgctggttga

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