KEGG T02983: 102630394

Citrus sinensis (Valencia orange): 102630394

Entry

102630394         CDS       T02983

Name

(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11 isoform X1

K11654

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]

Organism

cit Citrus sinensis (Valencia orange)

Pathway

cit03082

ATP-dependent chromatin remodeling

Brite

KEGG Orthology (KO) [BR:cit00001]
09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102630394
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cit03021]
    102630394
   03036 Chromosome and associated proteins [BR:cit03036]
    102630394
Transcription machinery [BR:cit03021]
Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     102630394
Chromosome and associated proteins [BR:cit03036]
Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    102630394
   RSF complex
    102630394
   WICH complex
    102630394
   B-WICH complex
    102630394
   NORC complex
    102630394
   BRF complex
    102630394
   NuRF complex (fruit fly)
    102630394

SSDB

Motif

Pfam:

SNF2-rel_dom SLIDE Helicase_C ResIII HAND Myb_DNA-binding DBINO DEAD HDA2-3 AAA_14

Other DBs

NCBI-GeneID:

102630394

NCBI-ProteinID:

XP_006489131

LinkDB

Position

1:complement(join(22849940..22849957,22850032..22850133,22850388..22850603,22850707..22850885,22851232..22851397,22851471..22851529,22851630..22851684,22851777..22851846,22851943..22852032,22852128..22852204,22852313..22852344,22852471..22852659,22852760..22852853,22852946..22853033,22853123..22853343,22853504..22853577,22853653..22853935,22854025..22854159,22854774..22854995,22855081..22855260,22855435..22855532,22855885..22855988,22856908..22857014,22857100..22857231,22857590..22857802))

AA seq 1067 aa
MAKPSKARESSDDALSNGSSSSEEEQINDQINEDDEEELEAVARSADADSDDDNSPASED
EAAADGDDVEEDDDSGANADISKREKQRLKEMQKLKKQKIQELLDKQNAAIDADMNNRGK
GRLKYLLQQTELFSHFAKGDQSASQKKAKGRGRHASKLTEEEEDEEYLKEEEDGLSNTRL
VTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGIT
GPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRENLLVAGKFDVCVTSFEM
AIKEKSALRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWS
LLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKE
TILKVGMSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPP
YTTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDG
NTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQD
RAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQM
VRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTAELYDF
DDEKDENKFDFKKIVSDNWIEPPKRERKRNYSESEYFKQTMRQGGPAKPKEPRIPRMPQL
HDFQFFNTQRLSELYEKEVRYLMQTHQKNQLKDTIDVEEPEDVGDPLTAEELEEKERLLE
EGFSSWSRRDFNTFIRACEKYGRNDIKSIASEMDGKSEEEVERYAKVFKERYKELNDYDR
IIKNIERGEARISRKDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMV
HKLGYGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQA
RKEKKLAKNMTPSKRGGGRQPNESPSSLKKRKQLSMDDYVSSGKRRK

NT seq 3204 nt +upstreamnt +downstreamnt
atggcgaaaccctctaaggcgcgggaatcgtccgatgatgccttgtccaacggctccagt
tcgtcggaggaagagcaaatcaacgatcagatcaacgaagacgacgaggaggagctcgaa
gccgtggctcgctctgctgatgctgactctgacgacgataactctccggcgtccgaagac
gaggccgctgccgacggagacgacgttgaagaggatgacgacagtggggctaatgcagat
attagcaagcgtgaaaagcagagactaaaagaaatgcagaaattgaagaaacaaaagatt
caggaactattggataaacaaaatgctgctattgatgctgatatgaacaatagggggaag
ggccgattgaagtatctattgcagcaaacagagttgttttctcattttgcgaaaggcgat
caatctgcatctcagaagaaggcaaaaggaaggggacgccatgcatctaaactcactgaa
gaggaagaagatgaagaatacctcaaggaagaagaagatggtttgtcaaacacgcggctg
gtaacacaaccgtcttgtattcagggaaaaatgagggattaccaacttgctggattgaac
tggcttatacggttatatgagaatgggataaatggaattcttgctgatgaaatgggtctt
ggtaaaaccttgcaaaccatatccttgttgggctaccttcatgagttcagaggaattact
ggccctcatatggtggttgctccaaaatctacccttggtaactggatgaacgaaattcgt
cgtttctgcccagttttacgtgctgtgaagtttcttggaaatcctgaagaaaggagacat
atacgtgaaaatttactggttgctgggaagtttgatgtctgtgtaacaagttttgaaatg
gccattaaagagaaatctgctttgcgtcgttttagctggcgttatattatcattgatgaa
gctcatcgaattaagaatgaaaactctcttctttcaaagacaatgagactttataacacc
aattaccgccttctcatcacgggtactccacttcagaacaatcttcatgaattatggtcc
cttctaaactttttgcttccggagatatttagttcagctgaaacttttgatgaatggttc
caaatttctggcgaaaatgatcagcaggaagttgtccaacaacttcacaaggtcctccgg
ccgtttcttcttcgaagattgaagtcagatgttgagaaaggtttacctccaaaaaaggaa
actattctcaaagtgggcatgtcccaaatgcagaaacaatactacagggcattgctacag
aaagaccttgaagttgtgaatgcaggtggggaacgaaagcgtcttcttaacatagcaatg
cagcttcgtaaatgttgtaatcatccatatttgttccaaggtgctgaacctggccctcct
tatactaccggggatcatctaatcacaaatgctggtaaaatggttcttctggataagttg
cttccaaaactaaaggaacgtgattctagggttttaatattttctcagatgacaaggctc
ttggacattcttgaagactatttaatgtttcgtggatacctgtattgtcgaattgatgga
aatactggtggagaagatcgggatgcttcaattgaggcctttaataaaccaggaagtgag
aaatttgttttcctcttgtcaactagagctggaggacttggtatcaatcttgccactgcg
gatgttgtcatcctctatgatagtgactggaatcctcaagttgatctgcaagcacaggat
cgtgcccataggattggtcaaaagaaagaagttcaagtgttccgattttgcacagagtat
accattgaggagaaagttattgaaagggcatataaaaagcttgcacttgatgctctggtg
attcaacaaggacgattagctgagcagaaaactgtaaataaggatgagctgcttcagatg
gtgagatttggggctgaaatggttttcagttccaaggatagcacaattacagatgaggat
attgacagaattattgctaaaggagaagaggcgaccgctgagcttgatgccaaaatgaag
aaatttacagaagatgcaatcaaatttaaaatggatgacacggctgaattgtatgatttt
gatgatgagaaggatgagaacaagtttgatttcaagaagatagttagtgataactggatt
gaacctccaaagagagagcggaaacgcaattactctgaatctgagtactttaagcaaaca
atgcgccaaggtggtccagcaaaaccaaaagaacctcgaattcctcggatgcctcagctg
catgattttcagtttttcaacactcaaaggctaagtgagttgtatgaaaaagaagtacgc
tacttgatgcaaacacatcagaagaatcagctaaaagacaccattgatgtggaagagccc
gaagacgtgggagatccactgactgctgaagagttggaagaaaaggagcgattgttagaa
gaaggattttcttcttggagtagaagagatttcaatactttcattagggcttgtgagaag
tatggccgaaatgacataaaaagtattgcctcagaaatggatggaaaatctgaggaggaa
gttgaaagatacgctaaagttttcaaagaacgatacaaggagctaaatgactatgatagg
attattaagaatattgaaagaggagaggctagaatttctcgaaaagatgagattatgaaa
gccattgggaagaaattggatcgctacaagaatccatggctggaactaaagattcagtat
ggacagaacaaagggaaattatacaatgaagaatgtgatcgtttcatgatatgcatggtt
cacaagcttggatatggcaattgggatgagctgaaggcagcatttcgcacttcaccctta
tttcgatttgactggtttgtgaaatcccgtacaactcaagaattagctaggagatgtgat
actctcattcggttggtggagaaggaaaaccaggaatatgatgaaagagaaagacaggcc
cgtaaagaaaagaagcttgccaagaacatgacaccatcaaagcgtggtggggggaggcag
ccaaatgagagccctagttccttaaagaaacggaagcaattatcaatggatgactatgtg
agctcgggaaagaggaggaaatga

DBGET integrated database retrieval system