Citrus sinensis (Valencia orange): 102630424
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Entry
102630424 CDS
T02983
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
102630424
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
102630424
NCBI-ProteinID:
XP_006472600
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All DBs
Position
5:complement(join(32003060..32003063,32003343..32004145,32004754..32005460,32006150..32006368,32006889..32007201))
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AA seq
681 aa
AA seq
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MSGRGCSIVWFRRDLRVEDNPALAAGVRAGAVIAVFIWAPEEEGPYYPGRVSRWWLKHSL
SHLDSSLRSLGTSLVTKRSTDSVSSLLEVVKATGATQLFFNHLYDPLSLVRDHRAKEALT
AQGIAVRSFNADLLYEPWDVNDAQGQPFATFAAFWEKCLSMPFDPDAPLLPPKRINSGDM
SRCPSDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLIEYSKNRRKADSATT
SFLSPHLHFGEVSVRKVFHLVRIKQVSWANEGNKAGDESVNLFLKSIGLREYSRYMSFNH
PYSHERPLLGHLKFFSWVVDEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGRAFDRIDNPQFEGYKFD
PNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPFPIVRIDAAKCRLDEA
LSEMWQQEAASRAAIENGTEEGLGDSSDSAPIAFPPDIQMEEIPEPARNNLPTTARRYED
QMVPSMTTSLVRVEEEESSLELRNSAEESRAEVPRNANVNQEPRRDTLNQGVLQTVHNNN
AFQQFNAAIVLANAEDSTAESSSTSRRERDGGVVPVWSPATSSYSEQLVGDENGIGTSSS
YLQRHPQSHQIMNCRRLSQTG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtcgtggttgtagcatagtttggttcagaagagatctaagagttgaagataat
ccagcactagcagctggtgttagagctggtgctgtaattgctgttttcatttgggcacct
gaagaagagggtccttattatcctgggagagtgtctaggtggtggctcaagcacagcttg
tctcatctggattcttctttgaggagtcttggtacttctcttgtcactaagagatcaact
gatagtgtttcttctcttcttgaggttgttaaagctactggtgctactcagctcttcttc
aaccatttatatgaccccctgtcgctggttcgagatcaccgagctaaggaggctctaact
gctcaaggaatagctgtgcgctcctttaatgctgacttgctctatgagccgtgggatgta
aatgatgcccaaggccaacctttcgcgacctttgctgctttctgggagaaatgccttagc
atgccttttgaccctgacgctccacttctccctcctaagaggataaattcaggtgatatg
tccaggtgtccttcagatacattggtgtttgaagatgaatcagagaagggaagcaatgca
cttcttgctcgagcatggtctcctggctggagcaatgctgataaggctctgaccactttc
attaatgggcctttaattgagtactctaagaatcggagaaaggctgatagtgctacaacc
tcatttctctctccacatttgcattttggggaggttagtgtgaggaaagtcttccatctt
gtccgcatcaagcaggtttcatgggccaatgaagggaacaaggctggtgatgagagtgtg
aacttgtttctcaagtcaattggtcttcgggaatattcaaggtacatgagttttaaccat
ccttacagtcatgaaaggcctcttcttgggcaccttaagttcttttcttgggttgtggat
gagggctattttaaggcatggaggcaaggtagaactggttatccactggtggatgctggc
atgagagagttgtgggccactggttggcttcatgatcggatacgagtagtagtttctagt
ttctttgtaaaagttctacagcttccatggagatgggggatgaaatatttttgggatacc
ctcttggatgcagatttagaaagtgatgctcttggttggcagtacatatctggtactatc
cctgatggccgtgcttttgaccgaattgacaatccacagtttgagggttacaagtttgac
cccaatggagaatatgtacgacggtggctccctgaacttgccagactgcccactgaatgg
atacaccacccatggaatgcaccagaatctgtgctccaagctgctggcattgagctgggt
tccaattacccttttcccatagtacggattgacgcagcaaaatgcaggctggacgaagca
ctttcagaaatgtggcagcaagaagcagcttcaagagctgcaattgagaatggaactgag
gaaggtcttggagactcctctgactcagccccaattgcctttcctccggacatacagatg
gaggaaatccctgaacctgctaggaacaaccttcctaccacagctcggcgttatgaggat
cagatggtcccaagcatgactacttctttggtgagagttgaagaggaagagtcttctttg
gagcttcgaaattcagcagaagaaagcagagcagaagtgccgagaaatgcaaatgtaaat
caagaacctagaagggacactttaaaccaaggtgttctccaaactgttcataacaacaac
gcttttcaacaatttaatgccgcaatagtgctggcaaatgctgaagactccacagcagaa
tcttcaagtactagtagaagagagagagacggaggggtggttccagtttggtctcctgca
acttctagttactcagagcagctagtaggtgatgaaaatggcattggaacgagttcatct
tacttgcagaggcatccacagtctcaccaaataatgaattgtaggcggctttctcaaact
gggtaa
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