Citrus sinensis (Valencia orange): 102630435
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Entry
102630435 CDS
T02983
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
KO
K13111
WD40 repeat-containing protein SMU1
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102630435
Spliceosome [BR:
cit03041
]
Complex B
Other components
Complex B specific factors
102630435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
LisH_TPL
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_ACSF4
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
Ge1_WD40
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_SPT8
DUF7165
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
Beta-prop_HPS5
Beta-prop_LRRK2
VPS8_N
PROPPIN
PD40
Beta-prop_IP5PC_F
RMC1_N
zf_topless
Motif
Other DBs
NCBI-GeneID:
102630435
NCBI-ProteinID:
XP_006474451
LinkDB
All DBs
Position
9:join(30667706..30667731,30667842..30668052,30668141..30668293,30668401..30668449,30668795..30668878,30669189..30669292,30669611..30669697,30669788..30669841,30670301..30670396,30671022..30671149,30671296..30671422,30671506..30671565,30671657..30671764,30672237..30672337,30673064..30673115,30673441..30673539)
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AA seq
512 aa
AA seq
DB search
MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL
PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL
LVRTYFDAHEAYQDSTKERRRAQIAQAVAAEVSVVPPSRLMALIGQALKWQQHQGLLPPG
TQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVW
DYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRR
LERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDG
SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS
IYIMTPQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK
VHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgacattagaaatcgaagctcgagatgtgatcaagattgtgcttcaattctgcaaagag
aattctttgcagcaaacgtttcaaacgcttcagaacgagtgccaagtgtcgctgaatacc
gtggatagcattgagacatttgttgccgatatcaatagtggaagatgggatgcaattttg
cctcaagtagctcagcttaaacttccaagaaataaattggaggacttgtatgagcagatt
gtattggagatgattgaactgcgtgagctggatactgcacgtgcgattctgaggcaaact
caggcaatgggtgtaatgaagcaggaacaacccgaaagatatttgcggcttgagcatctt
cttgttaggacttactttgacgcacatgaggcttatcaagattccaccaaagagagacgc
cgtgctcaaattgcccaagctgttgctgcggaagtttctgtggttccaccatcacggtta
atggctctgattggtcaggccctgaagtggcagcagcaccaagggttactacctccagga
acacagtttgacttgtttcgaggaactgctgctatgaaacaggatgtagaagacatgtat
ccaacaactctttcccacaccattaagtttgggacaaaaagtcatgcagaatgtgctcgg
ttctctccagatggccagtttcttgtctcttgctcttttgatggatttattgaggtctgg
gattatttaagtgggaaactcaagaaggatctacaataccaggctgatgaaactttcatg
atgcatgatgaaactgtcctctgtattgagtttagcagagactcagagatgcttgcctct
gggtcgcaagatgggaagatcaaagtttggcgcataagaagcggtcaatgtttgcgccgt
cttgaacgagcacattcagaaggtgttactagtcttgttttctctcgagatggaagccaa
attctaagtacatcttttgacagcacagcaagaattcatggactaaaatctgggaaattg
ttgaaagagttccgaggtcattcgtcttacgtaaatgatgccatattcacaaatgatggc
agccgtgtcgttactgcctcaagtgattgtacagtaaaggtctgggacctgaagagtact
gattgcctccagacatttaagccaccacctcctttgaggggaggtgatgcttcagtgaac
tctgtccatttattcccaaagaatcctgatcacatagtcgtatgtaataagacatcctca
atatacataatgactcctcaaggacaggttgtgaagagtttttcttctggtaaaagagaa
ggtggagattttgttgctgcttgtgtttcaccgaaaggtgaatggatctattgtgttggt
gaagacaggaacttgtactgcttcagccatcagtctggtaaactagagcatctaatgaag
gtccatgaaaaggatgtaattggtgtgactcatcatccccatagaaaccttctggcaaca
tatggtgaagattgcacaatgaaattatggaagccttga
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integrated database retrieval system
