Citrus sinensis (Valencia orange): 102630460
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Entry
102630460 CDS
T02983
Name
(RefSeq) protein RIK isoform X1
KO
K25780
kelch domain-containing protein 4
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102630460
Spliceosome [BR:
cit03041
]
Complex B
Other components
Prp19-related factors
102630460
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_12
KH-I_KHDC4-BBP
Herpes_capsid
Motif
Other DBs
NCBI-GeneID:
102630460
NCBI-ProteinID:
XP_006482745
LinkDB
All DBs
Position
6:join(26012123..26012202,26012636..26012840,26013674..26013775,26013894..26013928,26014066..26014141,26014995..26015117,26015200..26015277,26015655..26015748,26015845..26015962,26016316..26016832,26018357..26018588,26018767..26018822)
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AA seq
571 aa
AA seq
DB search
MTEDSHHTFSSDDSAISTDGSSQTRQRKKRKWDQPAESLLNFPLASFGISLPGVPVAPVV
PAPAAAAFFTNPPVASGATVPPVVLQGPLPPKFNQPKVQDELIIAREIVINDSESSVRYK
LTKRQTQEEIQKCTGAVVITRGKYRPPNAPPDGEKPLYLHISAGAHLKETAERILAVDHA
AAMVEEMLKQGHAGFPTLQTVMGNGVQAMSTSVFLGFDADASLNIAARIRGPNDQYINHI
MNETGATVLLRGRGSGNSEGLQGEEVHQPLHLFLSSNNPKSLEEAKRLAENLLDTISAEC
GASRVSSCKVYNAVPPPQQLLTGIQGFGNEQKLNAGSAVILTSTVNLSSVPLAPSVPGVT
TVYSQGMMLQSGGILNSVQPQQNIVGYPQPVSTGGTSYSGYEGIYPQATPLQQVALALRQ
SSSPLTSLVAPTASVSSTATTSTTSTAMSEKEKRPPQKRKFQELPVGSKGPAKHNQGSEI
PNRSELSANLDVRNVSNMPPPSKLVQPVDNGMPHPPPRNMPPPPPPKFTLLAPTAKLHDK
NNSLNKTKSDNIPVVSDTLVKLMEYGEDDDD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagacagtcatcatacgttttcgtcggacgactccgccatatctaccgacggc
tcctctcaaacacggcaaaggaaaaagaggaagtgggaccagccagcggaatcattgctt
aatttccctctagccagctttggaatttccttgcctggtgtgccagttgccccagttgtc
cctgctcctgctgcagctgctttcttcacaaatccaccggtggctagcggtgcaactgtt
ccaccggttgtgctccaggggcctctgccacccaagttcaatcaacctaaggtccaagat
gagttaataattgcacgggagattgttataaatgattcggagtcttctgttcgctacaaa
ctaactaaacgtcaaacacaggaagagattcaaaaatgcactggtgctgtggtaataact
aggggtaaatatcgtccgccaaatgccccgcccgatggtgaaaagcctctatatcttcac
atatctgcaggggctcatttaaaagagacagcggaacgaattttagcagttgatcatgca
gctgccatggttgaagaaatgctgaaacagggtcatgcaggttttcccactttgcaaaca
gttatgggcaatggggtccaggcaatgagtacatctgtgtttttgggttttgatgctgac
gcatctctgaacattgctgctcgcattcgtggaccaaatgaccagtatataaatcacatt
atgaatgagacaggagcaactgtcttactaagagggcgtggttctggaaactctgaaggc
ctgcaaggcgaagaagtgcatcaaccattgcatttattcttgtccagtaataatcctaaa
agcttggaagaagcaaagcgtctggcagaaaatctgttggatacaatcagtgcagagtgt
ggtgcctccagggtttcatcatgtaaagtctataacgctgtcccacccccacagcagttg
ttgactggcattcagggttttggcaatgagcaaaagttgaatgcaggttctgctgtcata
ttgacatctacagtgaacttatcatcagttccactggctccttcagttcctggagttact
actgtctattctcaaggcatgatgttacagtccggaggaatattgaacagtgtgcagcca
caacaaaatatagttggatatcctcagcctgtatcaactggaggaacaagctatagtgga
tatgaaggaatatatcctcaggctacacctctccaacaagttgccctagcccttagacag
tcatcttctcctctcacatctttagttgctccgacagcatcagtgtcaagcacggcaaca
acatcaacaacgtcaacagccatgtctgaaaaggagaagcgacctccacagaagcgaaaa
tttcaggagctaccagttggttcaaagggccctgcaaaacacaaccagggatcagaaata
ccaaatcgaagtgagctgtcagccaatttggatgtgagaaatgtatcaaatatgccacct
ccaagtaagttggtccagcccgtagacaatggaatgccccatccgcctccaagaaacatg
cctcctccaccaccaccaaaatttaccttgttagctcccactgcaaaattgcatgacaag
aacaatagtttgaataaaacaaaatctgataatatccctgtcgtttctgataccttggtc
aagctaatggaatatggggaagatgacgacgactaa
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