Citrus sinensis (Valencia orange): 102630644
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Entry
102630644 CDS
T02983
Name
(RefSeq) oligouridylate-binding protein 1-like isoform X2
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102630644
03041 Spliceosome [BR:
cit03041
]
102630644
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
102630644
Spliceosome [BR:
cit03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102630644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
102630644
NCBI-ProteinID:
XP_006474698
LinkDB
All DBs
Position
9:join(29709062..29709148,29709562..29709623,29709858..29709960,29710148..29710224,29710317..29710378,29710469..29710556,29710681..29710756,29710841..29710871,29711608..29711727,29712566..29712651,29713313..29713486,29714259..29714534)
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AA seq
413 aa
AA seq
DB search
MQQHRLKQQTMMQQQSLYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVT
NALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA
YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVS
FRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDFKSVVELTNGTSEDGQE
KSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYST
HPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYER
QIALSKIAGAQALMHPQAQHALKLGMGAAGASQAIYDSSGFQNVATTQQLMYY
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcataggctgaagcaacaaacaatgatgcagcagcagtctttataccaatac
catcccagtctcttagctgctcctcagatagagcctatcttgagtggaaatctgcctccg
cgatttgatgcaagtacatgccgcagcgtgtatgttggaaacattcatcctcaggttaca
aatgccctgcttcaagaggttttttcaagtaccggtccccttgaaggatgcaagctcatt
aaaaaagataagtcatcctatggctttgtggactactttgatcgcagatcagctgccctt
gcaattgtgactcttaatggaaggcacatatttggacaacctattaaagtaaactgggct
tatgctagcagccagagagaggacacatcaggtcatttcaacgtttttgttggtgatctt
agccctgaagtaacagatgctactttgtttgcgtgcttctctgtgtttcctacttgttcg
gatgcaagggttatgtgggaccaaaagactgggcgttcaaggggttttgggtttgtttct
tttcggaatcaggaggatgcccaaagtgcaataaatgacttaaatgggaagtggcttggt
aatagacagattcggtgcaactgggctgcaaaaggtgctacctctggtgatgaaaagcaa
agttcagatttcaaaagtgttgtagagcttacaaatggaacatctgaagatggtcaagag
aagagcaatgaggacgctccggagaacaatcctcagtatacaactgtttatgttggcaat
ctttcttcagaggttacctcagttgatctccaccgacattttcatgctctttgtgttgga
acaattgaagatgttcgggtacagcgagacaagggtttcgggtttgtgagatactctaca
catcctgaagctgccctggctattcagatgggtaatgctcggattctctgcggcaaacca
attaagtgttcgtggggaagtaaaccaactcccccaggaacaagctctactcctcttcct
ccacctcctgcaccacatttgccaggtttctcagccacagaccttgctgcctatgagcga
cagatagcattaagcaaaatagctggggcacaggccctaatgcatccgcaggcacagcat
gcccttaagctgggaatgggtgctgctggggctagtcaagcaatctatgacagtagtggg
ttccagaacgtcgcaacaacccagcagcttatgtactattag
DBGET
integrated database retrieval system
