Citrus sinensis (Valencia orange): 102630664
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Entry
102630664 CDS
T02983
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102630664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cit03009
]
102630664
Ribosome biogenesis [BR:
cit03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102630664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
DUF7165
Beta-prop_VPS8
Beta-prop_TEP1_2nd
Cytochrom_D1
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
102630664
NCBI-ProteinID:
XP_006479593
LinkDB
All DBs
Position
3:complement(43202691..43204385)
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AA seq
564 aa
AA seq
DB search
MSLISQNAVSRNRLKTKTEDGEGPLAVEENKDVEDGKESDLETSRAKKRKREKEKRSEME
QVKEMKKLENILFGSLYAPVEFGKEDEEKVQPEAETGSAVYFVDPSANSMLSVNEEDAQF
SGESDDEEEAWQKKPVWVDEEEEQTNVNIANVNRLRKLRKEEDESLISGAEYVSRLRAQH
VKLNPGTEWAQLDSRSRDNDPYNESSDEETQAVVARGYEDTEAVDDILRTDEDLVVKSSA
KLSPGLLEYSRLIDANAEESSNGPINSVQFHRNAQLLLVAGLDRRLRFFQIDGKRNTKIQ
SIFLEDCPVRKASFLPDGSQAIIAGRRKFFYSLDLVKAKADKIGPLVGREEKSLEFFEVS
PDSSVIAFVGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADDGKQLLSSGGDGQVYHWD
LRTRTCIHRAVDEGCINGTALCTSPDGTFFAAGSDSGIVNVYNRQEFLGGKRKPIKTIEN
LTTKVDFMKFNNDAQILAICSTMKKNSLKLIHIPSYNVFSNWPPPNRNLQYPRCLDFSPG
GGFMAVGNAAGKVFLYKLNHYHHA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgatatctcaaaatgctgtttctagaaatagattaaagacaaaaacagaggac
ggtgaggggcctttggctgtggaagagaacaaagatgtagaggatggaaaagagtccgac
ttggaaacatcacgggctaagaagagaaagagagaaaaggaaaaacgaagcgaaatggag
caagtgaaggaaatgaaaaagttggagaacattttgtttggatcactttatgctcctgtt
gaatttgggaaggaagatgaggaaaaggtccaacctgaagccgagactggttctgccgtg
tactttgtcgacccttctgctaatagcatgttgtctgttaatgaagaggatgcacaattt
tcaggggaaagtgacgacgaagaggaagcttggcaaaagaaaccggtctgggtggatgag
gaagaggaacagaccaatgtaaatatagctaacgttaacagattgaggaagctgaggaag
gaagaggatgagagtttgatttcaggtgcagagtatgtttcaagactgagggctcagcat
gttaagttgaaccctggtacggaatgggctcaactcgattcacggtcaagggataatgac
ccttataatgaatcatcggatgaagaaactcaagcagtggtggctcgtggttatgaagat
actgaagctgttgacgatattctaagaacagacgaagatcttgttgtgaagagcagtgcc
aagttgtctcctggacttcttgagtactcaagactcattgatgcaaatgctgaggaatca
tcaaatggtcctataaattcagttcagttccatcgtaatgctcagttgctacttgttgct
gggttggatagaagactcagattttttcagattgatggcaaacggaatactaaaatacag
agcattttccttgaagattgtcctgttcgaaaggcatctttcttacctgatggttctcag
gccataatagctgggagaaggaagttcttttacagccttgatttagtgaaagcaaaggct
gataaaataggccccctggttggtagggaggagaaaagcttggaattttttgaagtttcc
cctgattctagcgtgattgcatttgtgggcaatgaaggttatatcttgttggtctcgtct
aaaacaaaggagctgattggaactttaaagatgaatggaactgttcgttctctggctttt
gccgatgatgggaagcaattgctgagttctggaggtgatgggcaggtctatcattgggat
ttgagaacaagaacatgcatccacagagcagttgatgaagggtgcataaatggtacagct
ctttgcacttcaccggatggaactttctttgccgcaggttctgacagtgggatagtgaat
gtttacaacagacaggagtttttagggggtaagagaaaaccaatcaagaccattgaaaat
ctgaccaccaaagtggattttatgaaattcaataatgatgctcaaatattggctatttgt
tctaccatgaagaagaacagtttgaagttgatacacattccatcatataatgttttctct
aactggcctcctccaaataggaacctgcaatatcctcgatgtctggatttcagtcctggt
ggtggttttatggctgtgggaaatgctgcaggaaaagtgtttttatacaagttgaatcat
taccaccatgcatag
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integrated database retrieval system
