KEGG   Citrus sinensis (Valencia orange): 102630678
Entry
102630678         CDS       T02983                                 
Name
(RefSeq) protein argonaute 5-like isoform X1
  KO
K11593  eukaryotic translation initiation factor 2C
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102630678
   03036 Chromosome and associated proteins [BR:cit03036]
    102630678
Messenger RNA biogenesis [BR:cit03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102630678
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    102630678
   RNA interference (RNAi) pathway
    RITS (RNA-induced transcriptional silencing) complex
     102630678
   microRNA pathway
    RISC loading complex
     102630678
SSDB
Motif
Pfam: Piwi ArgoN PAZ ArgoL1 ArgoL2 ArgoMid Tudor_2
Other DBs
NCBI-GeneID: 102630678
NCBI-ProteinID: XP_052288318
LinkDB
Position
8:join(26236642..26237100,26237298..26237545,26237635..26237784,26237992..26238125,26238242..26238345,26239030..26239133,26239563..26239698,26239785..26239901,26240028..26240138,26240228..26240299,26240687..26240806,26240911..26241061,26241142..26241263,26241548..26241685,26241758..26241900,26241975..26242037,26242110..26242173,26242298..26242433,26242564..26242637,26242771..26242865,26242971..26243002,26243131..26243306)
AA seq 982 aa
MSRRGGGGRRRDSCRDQPTQAPAPSFQRGGGGAAGPRGRGRQGQRGGAGRGSHSGSGAAP
SSPHTASTSTAPAPSSPSVSESSPSSSSVSTLVEETEQKLSLAAPAAATLPPLSSQELRL
PVRPGIGTVGRKCVVRANHFMVQLAERDIHHYDVSIDQVQDLESNRYSEVTSKKINRQII
SHLINLYGLTNLGGRIPAYDGMKNIYTAGPLPFESKEFIINLPDSDPHPSSSTSPGREGQ
FRVVIRLASMPDLYTLQQFLRRMHFEAPYHVIQVLDVVLRAAPSEKHTVLGRSFFSADLG
PMGQLGDDVEYWRGYFQSLRPTQMGLSLNIDVSASSFYKPILVTEFVQYYCSDLSRPLSD
QVRLKVKKALKGIKVVLRHMGYNLNCKITGITSQPMSQVMFTDGSVTEMSVVQYFLERHN
IALQFTSLPALEAGTEERRIYLPMELSRIVEGQRYTKRLNERQVTALLRATCQRPRDREA
NIQTMARKNAYNKDTLVNKEFGIQVADGLTSFDARILPAPMLKYHESGREASVNPDFGQW
NMINKKMFNGGTVQVWTCMNFSTCLNQDVSRFCQRLVDMCKKKGMVFNPQPVIPISSYNP
NQIEKELVDVHSKTTQPGKQLQLLIIILPDVSRSYGRIKRVCETELGIVSQCCQPKHASS
RNMQYFENVALKINVKVGGRNTVLVDAVQKRIPLVTDRPTIIFGADVTHPQPGEDSSPSI
AAVVASMDWPEVTKYRGLVSSQAHNEEIIQDLYKSIKDPQRGLVHGGMIRELLIDFRRST
NFKPHRIIFYRDGVSEGQFSQVLLHEMNAIRQACASIEEGYAPPVTFVVVQKRHHTRLFP
AEYNRRDLTDRSGNILPGTVVDTQICHPTEFDFYLNSHAGIQGTSRPTHYHVLYDENRFT
ADDLQMLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYIEDETSAGGSTGGTRSTAE
GSLAIRPLPVIKDNVKDVMFYC
NT seq 2949 nt   +upstreamnt  +downstreamnt
atgtctcgacgtggtggcggtggtcgtaggcgggattcttgccgtgaccagccgactcag
gcaccggcgccgtctttccagcgcggtggtggcggagccgcgggaccacggggccgaggt
cgtcaaggtcaacgtgggggtgctggtcgtggatcgcattccggctccggtgcagccccg
tcctcaccacacaccgcttcgacttcgacggcgccggctccttcgtctccgtctgtttca
gaatcctctccttcttcgtcttcagtttctactcttgtcgaagaaactgagcagaaactg
tcattggcggcaccagcggcggctactcttccccctttgtcgtcgcaggaattgagactt
ccggtgaggccgggaatcggaaccgttggcagaaaatgtgttgtccgagcaaatcacttt
atggtgcaacttgccgagagagacattcatcactatgatgtttcaattgatcaagtccaa
gatctcgaatcgaatcgatattcagaggtgacgtcaaaaaaaatcaacagacaaattatt
tctcacctgattaatttatatgggctgactaacttgggtggacgaatacctgcctatgat
ggtatgaagaacatttacacggcagggccgctgccttttgaatcgaaggaattcattatc
aatttacctgatagtgatcctcatcccagctcgtctaccagcccgggaagggagggtcag
tttagggtggttatcagattggcatcgatgcctgatctttacactctacagcagttctta
cgccgaatgcattttgaagctccgtaccatgttatacaagtgcttgatgttgttctcaga
gcagctccatcagagaagcatacagttctgggaaggtcatttttctcagctgatcttgga
ccaatgggtcagcttggtgatgacgttgaatattggcgtggatattttcagagtcttcgc
ccaacccagatggggctatctcttaatattgatgtttcagccagctccttttataagcca
attctagttactgagtttgttcagtattattgcagcgacttatcacgtcctctttctgat
caagtgcgtctgaaggtgaaaaaggcattgaagggaataaaggtagtgctcaggcatatg
gggtacaacttaaattgcaagatcactggaataaccagtcaaccgatgagccaagtaatg
tttacagatggcagtgtgacagagatgtcggtggttcaatattttcttgaaagacataat
attgcgcttcaattcacgtcattgcctgcccttgaagctggaactgaagagaggcgcatt
tatttgccaatggagctttctaggattgtcgagggacagagatatactaaaagattaaat
gaaagacaagtaactgctcttttaagagcaacctgtcagcgtcctcgggatcgtgaagca
aatatacagacgatggctaggaaaaatgcttacaataaagatactcttgtgaacaaggag
tttggaattcaagtggctgatggtcttacatcgtttgatgctcgaatcctacctgctcca
atgcttaaatatcatgaatctggcagagaagcaagcgtgaatcctgattttgggcaatgg
aacatgattaacaagaaaatgttcaatggtgggacagtgcaagtttggacttgtatgaac
ttctcaacgtgtttgaaccaggatgtgagccggttctgtcaacggttggtagacatgtgc
aagaaaaagggaatggtatttaacccgcagcctgtcattcccataagttcatacaaccca
aatcaaattgagaaggaacttgtagacgttcacagtaagactactcagccagggaaacag
cttcagctgttgataattattttacctgatgttagcagatcatatggaagaattaagcga
gtttgtgaaacagaacttgggattgtttcacaatgctgtcagcctaagcacgcatccagt
cgcaatatgcagtattttgaaaatgtggctcttaaaatcaatgtgaaggttggaggacga
aacactgtgctcgttgatgctgttcagaaaagaattcctcttgtgactgatagacctaca
attatatttggtgcagatgtcacccatccacaaccaggagaagactctagcccttcaata
gcggccgtggtggcctcaatggattggccagaagtaaccaagtacagaggacttgtctct
tctcaggcacataatgaggaaattatccaagatctctataaatctattaaagatcctcag
aggggtttagttcatggagggatgatccgggaactgttaattgacttcagaagatcaacc
aacttcaaacctcacaggattattttctaccgagatggtgttagtgaagggcagttcagt
caggttttgctccatgaaatgaatgctatccggcaggcctgtgcctcaattgaggaggga
tatgcaccaccagttacgtttgttgtggtacagaaaaggcatcatactcgcctttttcct
gctgagtacaacagacgtgatctgacagataggagtggaaatattttaccaggaactgtt
gtcgatactcaaatttgtcaccctacagaattcgatttttacctcaacagccatgcagga
attcagggaaccagtcgcccaactcactaccatgtattgtatgatgagaaccgttttact
gcagatgacttgcaaatgttaacaaataacttgtgttacacgtatgcaaggtgtactcga
tcagtttcaatagtgcctcctgcatactatgcacatttagcagcttttcgggctcgtttt
tatatcgaggatgaaacatctgcgggtggatccacaggagggactaggagcacggcggag
gggagtttggctatccggcctcttcccgtcatcaaggataatgtgaaagatgtaatgttt
tactgctga

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