Citrus sinensis (Valencia orange): 102630710
Help
Entry
102630710 CDS
T02983
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
102630710
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cit04040
]
102630710
Ion channels [BR:
cit04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102630710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
102630710
NCBI-ProteinID:
XP_006490551
UniProt:
A0A067EXZ0
LinkDB
All DBs
Position
9:join(1171369..1171397,1171807..1172374,1172523..1172735,1173705..1173976,1174334..1174445,1174705..1174941,1175044..1175742)
Genome browser
AA seq
709 aa
AA seq
DB search
MNFQSEKLVRFNDWNAEKCPDGQYPLDYGLHSGRLRTTINSVPAKFQGGFESGSERFKRI
KRTLKYCSFNSFVNKGLGSGKKVLDPQGAFLQKWNKIFVLSCVIAVSLDPLFFYVPVING
DRKCVDLDKKMETTASVLRSFTDIFYIFHIILQFRTGFIAPSSRVFGRGVLVEDTWLIAK
KYMSSHFLVDILAVLPLPQVVILIIIPNMGGSEVVNTKNLLKFVVLFQYVPRFLRIYPLY
KEVTRTSGILTETAWAGAAFNLFLYMLASHVLGASWYLFSIERETTCWKGHCKMDNGCKL
YCDDGQGNNAFLGDFCPIQPADTKLFNFGIFLGALESGIVESTYFPKKFFYCFWWGLRNL
SSLGQNLETSTYVWEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQ
WMAHRLLPDTLRERIRRYEQYKWQETRGVDEENLLCNLPKDLRRDIKRHLCLALLMRVPL
FEKMDEQLLDALCDRLKPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNGGRTGFFNS
EYLGAGDFCGEELLTWALDPQSSSNLPISTRTVRALTEVEAFALMADDLKFVASQFRRLH
SKQLRHTFRFYSQQWRSWAACFIQAAWRRYSKKKLEESLRAEENRLQDALAKAGGSSPSL
GATIYASRFAANALRLIRRNSTRKTRVPERVPPMLLQKPAEPDFTVEEQ
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaatttccagtccgagaagctagtgaggtttaatgattggaacgcggagaaatgccct
gatggacaatatcctttggattatgggttgcactctgggagactccgtacgacaattaac
tcagttccagcgaagttccaaggaggctttgaatctggttccgagaggtttaagaggatt
aaaagaacactaaaatactgctcctttaatagttttgtgaataaaggcttgggttcaggg
aagaaggttcttgatccacagggagcattccttcagaagtggaataagatatttgtactg
tcgtgtgtgattgctgtctcactggatcctttgttcttttatgtacctgtgattaacggt
gatagaaaatgtgttgatttggacaaaaagatggagactacagctagcgtgttgcgttct
ttcactgatatcttttatatatttcatattattcttcagtttcgaactggttttattgca
ccctcttctcgagtctttggaagaggtgttttagttgaagatacttggttaattgcaaag
aagtatatgtcatcacacttcttagttgacattcttgcagttcttccactcccacaggta
gtgattttgatcataattcctaacatgggtggatcggaagtggtgaatacgaagaatttg
ttgaaatttgttgttttatttcaatatgtgcctaggtttcttcgaatatatccgttatat
aaggaagttacaaggacttctggtatactcactgaaactgcatgggctggagcggcattt
aatctcttcctttacatgcttgctagccatgtacttggagcatcttggtatctgttttct
atagaaagagaaaccacttgctggaagggccactgtaagatggataatggatgcaaattg
tattgtgatgatggtcaaggaaataacgcatttttgggtgatttttgccctatacagccg
gcagataccaaactctttaattttggaatattcctaggtgctcttgagtctggtattgtg
gagtcaacatattttccaaagaagttcttttactgtttttggtggggcctacgaaatctg
agttctctgggtcaaaaccttgaaacaagtacttatgtctgggaaatatgctttgcagtc
tttatatccatttctggcttagtgctgttttcatttctcattggaaacatgcagacgtac
ttgcaatctacaacaactagattagaggaaatgagagtgaaaagacgtgatgcagaacaa
tggatggcccaccgcttactccctgatactttgagggagcggattaggcgttatgagcaa
tacaaatggcaagaaaccagaggtgttgatgaagagaatctgctttgtaatcttcccaag
gaccttagaagggacataaagcgccatctttgcttggctttgctcatgagggtgccattg
tttgaaaaaatggatgaacaacttttggatgcattgtgtgaccgcctcaagccggttctg
tacacggaggaaagctacattgtccgggagggtgatccagttgatgagatgctcttcatc
atgcgaggcaagctactgaccataactaccaatggtggaagaactggtttctttaactcc
gaatatcttggggccggtgacttttgtggagaagaacttctcacatgggctttggatcct
cagtcctcatctaatctccccatctcaactagaactgttagagctctgacagaagttgaa
gcttttgctctaatggctgatgacttgaaatttgtagcctctcaattcaggcggcttcac
agtaagcagctgcgccatactttcagattttactcacagcagtggaggtcttgggcagca
tgtttcatacaagcagcttggcgtcgatatagcaaaaagaagcttgaagaatccttgcgt
gcagaagagaataggttgcaagacgcattggccaaggctggtggaagttccccaagttta
ggagccaccatttatgcatcacgatttgctgctaatgcacttcgtcttataagacgtaat
agtactcgtaaaacaagggtgccggagagggtgccacccatgctgcttcaaaagccagcg
gagccagactttactgttgaagagcaatag
DBGET
integrated database retrieval system
