Citrus sinensis (Valencia orange): 102630854
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Entry
102630854 CDS
T02983
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
102630854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cit04121
]
102630854
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102630854
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
102630854
NCBI-ProteinID:
XP_006479877
UniProt:
A0A067HHE3
LinkDB
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Position
3:join(44844414..44844883,44845925..44846417,44846733..44847527)
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AA seq
585 aa
AA seq
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MLKKMSYSSLPEDVLEHVFSFVQSDKDRNVISLVCKSWYEIERWCRRRIFVGNCYAVSPR
MAIRRFPEVRSVELKGKPHFADFNLVPEGWGGYVYPWIRAMAGGYPWLEELKLKRMVVTD
ESLELIAKSFKNFKVLVLSSCEGFSTHGLAAIAADCKNLKELDLWESDVEDPSGNWLSKF
PDTCTSLVSLNIACLGSEVSFSALERLVVRCPNLRTLRLNRAVPLEKLAHLLRQAPQLVE
LGTGTYSADLRPDIFSNLAGAFSGCKELKSLSGFWDVVPAYLPAVYSVCSGLTTLNLSYA
TIQSPDLIKLVSQCPKLQCLWVLDYIEDSGLEALAATCKDLRELRVFPSEPFGDEPNVSL
TEQGLVLVSEGCPKLESVLYFCRRMSNDALVTIAKNRPSMIRFRLCIIDPQTPDYLTLEP
LDVGFGAIVQHCKDLRRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGESDLGLHHVLSG
CDSLRKLEIMDCPFGDKALLANAAKLETMRSLWMSSCSVSFEACKLLGQKMPRLNVEVID
ESGPPDSRPELPVKKLYIYRTVTGRRIDMPGFVWNVGEDSALRLS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagaaaatgtcatactcatccttgccggaggatgtattagagcacgtgttttcg
ttcgttcagtcggataaagaccggaacgtgatatcactggtgtgcaagtcgtggtatgag
atcgagcggtggtgcaggcggaggatattcgtcggaaactgttacgcagtgagtcctcgg
atggcgataaggcgtttcccggaggtgagatcggtggagctcaaaggaaagccgcacttt
gctgactttaatttggttcccgaggggtggggcgggtacgtctacccgtggatcagggcc
atggcgggcgggtacccgtggcttgaggagctcaagttgaagcggatggttgttacggat
gagagcttggagctgattgccaagtcgtttaagaattttaaagttttggttttgagttct
tgtgagggcttctccactcacggacttgctgccattgctgccgattgcaagaacttgaaa
gagttagacttgtgggagagtgacgtggaagatccgagtgggaattggctcagcaaattt
ccagatacatgtacatcactggtatctcttaacattgcttgcctagggtcagaggttagt
ttttcagctcttgagcgcttggtggttcggtgtcccaatctgaggactctgaggctcaac
cgtgctgtgcctcttgagaaacttgcccacctacttcgccaggcacctcagctggttgag
ttgggtacaggcacctactcagcagatctgcgccccgatatcttttcaaacctagcggga
gctttttcaggctgtaaagaacttaagagcctgtctggattttgggatgtggttccagct
tatcttcctgctgtttattctgtttgctctggcctaacaaccttgaatttgagctatgcc
accatccaaagtcctgatctaatcaagcttgttagccaatgtccaaaattgcagtgtctt
tgggtactggattacattgaagatagtggccttgaagcccttgcagcaacttgcaaggac
ctacgagaattgagggtgttcccatctgaaccttttggtgacgagccaaatgtatccttg
acagaacaagggcttgttcttgtttctgagggctgtcctaagctggagtcagttctctac
ttttgccgcagaatgtctaatgatgccttagttaccattgccaagaaccgtcccagcatg
attcgttttcgtctttgcattattgaccctcagactcctgattacttgaccctcgagcca
ctggatgtgggttttggagccattgttcagcattgcaaggatctccggcgcctctccctc
tctggtcttctcacagatcgtgttttcgagtacattgggacgtatgctaaaaagttagaa
atgctatctgtggcctttgctggagagagtgatttgggactccatcacgtgctgtctggg
tgtgatagccttcggaaactggagattatggactgtccctttggggacaaggctcttttg
gccaatgctgcgaagctggagacaatgcgatccctttggatgtcttcatgttcagtgagt
tttgaagcatgtaaactgctaggtcagaagatgcccaggctgaatgttgaagttattgac
gagagtggacccccagattcaaggccggagctccctgttaaaaagctttacatatacaga
actgtcaccgggcggaggattgacatgcctggttttgtttggaatgtgggtgaagattct
gcattgcggctttcttga
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