KEGG   Citrus sinensis (Valencia orange): 102631061
Entry
102631061         CDS       T02983                                 
Name
(RefSeq) chaperonin CPN60-1, mitochondrial-like isoform X1
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102631061
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102631061
   03110 Chaperones and folding catalysts [BR:cit03110]
    102631061
   03029 Mitochondrial biogenesis [BR:cit03029]
    102631061
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cit04147]
    102631061
Enzymes [BR:cit01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     102631061
Messenger RNA biogenesis [BR:cit03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     102631061
Chaperones and folding catalysts [BR:cit03110]
 Heat shock proteins
  HSP60 / Chaperonin
   102631061
Mitochondrial biogenesis [BR:cit03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    102631061
Exosome [BR:cit04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102631061
  Exosomal proteins of other body fluids (saliva and urine)
   102631061
  Exosomal proteins of breast cancer cells
   102631061
  Exosomal proteins of colorectal cancer cells
   102631061
  Exosomal proteins of bladder cancer cells
   102631061
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 102631061
NCBI-ProteinID: XP_052293207
LinkDB
Position
3:complement(join(40497847..40497916,40498048..40498126,40498233..40498338,40498951..40499054,40499157..40499247,40499368..40499463,40499553..40499628,40499739..40499800,40499887..40499973,40500683..40500766,40500855..40500941,40501119..40501220,40501959..40502054,40502145..40502317,40502452..40502542,40502928..40503048,40503188..40503225))
AA seq 520 aa
MLRLASRIASKVRLPNNNRLSWRRNYAHAGKDNKYGADDVIQRPMLSELITNKDLNVIEE
SFLASGARFVKEALNPICNPDEHGFKYWGVMSSAVAYRLLLAVKAKLDPKDIDVGLRLAV
DAVAEILRCRAQARTFEEISQVGTAAANGNKKIGELAAMACWRVGEHGHYIIRDNGKSKS
EVEFFNFMKLKWRPVSSYFTNQKAKDCVLENPFLLILENMIVSKNIVEQAIAQADSRPLL
IVAEDVEDKLIGSLILGKTCLQNKVSIAKPHEDDYEKETKAIMDDLAILTGGQVLNGATN
VSFMPLMLGSCKEVVISDDEMVILGGAGSQSAIEERRSQLRSAIELSTSGYEVRLLKQRL
HYLSNTATVFKVGPCKLPDKLNGARLTLEAVKRAMDQKIVPGAGIALLHVSKELDKLQST
NVGAKITIKLFQHALKLPVYTIASSAGFDGSFVVRKLLEQDNFDLGYDPIKGEYADVMKS
GICDPVETLIYELYHIASCVSGGCWACHYHPDKLKLYPNK
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgttacggttagcttctaggatcgcttccaaagtcaggttgcctaataacaacagatta
agttggagaagaaactatgctcatgctggcaaagataataagtatggtgctgatgatgtt
atccagaggcccatgttgagtgaattgataactaataaggatctcaatgttattgaagaa
agttttctggctagtggtgcaaggtttgtgaaggaagctctaaaccctatatgcaatcca
gatgaacatggatttaaatactggggtgtcatgagttcagctgtagcttatagattactg
ttagcagtgaaagctaagttggatcccaaggatatagatgtgggtcttcgtttggccgtt
gacgcagttgctgaaatcttacgctgcagagcacaggccagaacatttgaagaaatttcc
caggttggaaccgcagcagcaaatgggaacaaaaaaattggtgagcttgctgccatggct
tgttggagagttggagaacatggtcattatatcatcagggataatggaaaatcaaagagt
gaagtagagttttttaattttatgaaactaaaatggcgtcccgtgtcctcttacttcacc
aatcagaaggctaaagattgtgttttggaaaatcctttccttttaatccttgagaacatg
attgtgagcaagaatattgttgagcaagcaattgcacaggctgattctagacctttattg
attgttgctgaggatgttgaagataaactgataggttctcttattctgggcaagacttgt
ctccaaaacaaggtttctattgccaaacctcatgaagacgactatgaaaaagaaacgaag
gccatcatggatgatcttgccatactcacaggcggtcaggttttaaatggagcaaccaat
gttagttttatgccactaatgcttggctcatgcaaagaggttgttatatcagatgacgag
atggttatccttggtggggctggtagccagtcagctattgaagaaagacgttcacagttg
agatctgctattgaattgagcacttcgggttatgaagtaagattattaaaacagaggctc
cactatctttctaacactgctactgttttcaaggttggtccttgtaaattgcctgataag
cttaatggagctcgtttaaccctggaagctgtcaagcgcgcaatggatcaaaaaattgta
cctggtgctgggattgcacttttacatgtctcaaaggagctagacaaattgcaatctaca
aacgtcggtgctaagattaccatcaagctcttccagcatgctcttaagctgcctgtgtac
acaattgcttccagtgctggatttgatggttcattcgttgtcagaaaactattagagcaa
gacaattttgaccttggatatgatcccattaaaggtgaatatgcagatgtaatgaagtcc
ggaatttgcgatccggttgaaaccttaatatatgaattgtatcatatagcaagttgcgtt
agtggtggatgttgggcttgccattatcaccccgacaagttaaaattgtatcccaacaag
tag

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