Citrus sinensis (Valencia orange): 102631165
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Entry
102631165 CDS
T02983
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cit01009
]
102631165
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102631165
Enzymes [BR:
cit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
102631165
Protein phosphatases and associated proteins [BR:
cit01009
]
HAD phosphatases
Fcp/Scp phosphatases
102631165
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
102631165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
SH3-C_UBE2O
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
102631165
NCBI-ProteinID:
XP_006480289
LinkDB
All DBs
Position
6:join(1880368..1880953,1882026..1882394,1883193..1883822,1883919..1884112,1884194..1884457,1885741..1885899,1887180..1887284)
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AA seq
768 aa
AA seq
DB search
MAIKAVNDAVHKLQLALLEGIEAEKQLLAAGTLISKSDYNDVVTERSIADLCGYPLCSNP
LPPADSRTRKGRYRISLKEHKVYDVRENYLYCSTNCLVNSKAFSGSLNEERSVVVNEKKI
KEVLRVVIGKVEDDENVESKIVKLFGGLEVKENENAERNVGGVSVGGGGGGGGASDAIEG
YVPQHKPKPVPPRSKGVNDKTNKLNTKNDLSFNEMDFKSVIITNDEYSISKSPCGSTETE
SKSKFVEPEEQEDGEILDNRCTTSGSLASIKDDSCMHSRESTGRDELDAQEMPSALDAIE
GHVPQTRSMIKSSIKKKEGVNSKTNKPNSKKDLLFNEMDFTSVIMTNDEYSISKPHCGST
KTITKTKFEETKENADGENLEDQCAALGSLALIKDDSCRKSKTVVKAELSAQKVPSASVL
PLTGSNISTVDAEREIQVAKESISGVSMPKSSLKSSGSKKVGLSVTWADEKIDGCGSRDL
FEVRDMGDDGNDNNADDMLRFASAGACAMALSRVAEAVMSGDSDVADAVSEAGVIILPSP
RDGHEGESMEDPDVLEPEAALLKWPSKPGIPRSELFDPEDSWYDEPPEGFSLTLSPFATM
WMAIFAWISSSSLAYIYGRDESFHEEYLSVNGREYSQKIIMGDGHSSAIKQTLSGCLART
FPALVADLRLRIPVSTLEKGLEGLLNTMSFIDPLPAFKVKQWQVITVLFLDALSVCRIPA
LTPHMTNRTMLLRKVLDGAQISAEEYEVMKDFLMPLGRAPQFSSQSGA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcgattaaggcggtgaacgacgccgttcacaaactccaactcgccttactcgaaggc
atcgaggccgaaaaacaactactcgccgccggcactttaatctccaaaagcgactacaac
gacgtcgtaacggaacgatcaatcgcggacctctgcggctaccctctctgctcaaacccc
ttgccgccggccgattctcggacgcggaagggccggtaccggatttctctgaaggagcat
aaagtctacgacgttcgggagaattatctgtactgttcgacgaattgcctcgtgaatagc
aaggcgtttagcgggagtttgaacgaggagaggagtgtggtcgtgaacgagaagaagatt
aaggaggttttgagagtggttattgggaaagttgaggatgacgaaaatgtggagagtaag
attgtgaagctgtttggtggcttggaggtgaaggagaatgagaatgcggaaaggaatgtt
ggaggagtgagtgttggtggtggtggtggtggtggtggtgcttcagatgccattgaagga
tatgttccgcagcacaagcctaaacctgtgcctccacggagtaagggggttaatgataag
actaataaactgaatactaaaaatgatttaagtttcaatgagatggacttcaagagtgtc
ataatcactaatgacgagtatagcatttcaaagtcaccttgtggttcaactgagacagaa
tccaagtcaaaatttgtagaaccagaagagcaagaagatggtgaaatcttggataatcga
tgtaccacatcaggatcactagcttccattaaagatgattcttgcatgcattcaagagaa
tcaacaggaagagatgaacttgatgctcaggagatgccttcggctttggatgcaattgaa
ggccatgttccgcaaacaaggtcgatgatcaagtcttcgattaagaagaaagaaggggtt
aattctaagactaataagccaaatagtaaaaaggatttgcttttcaatgaaatggacttc
acgagtgtgataatgacaaacgatgagtatagcatttcaaagccacattgtggttcaacg
aagacaataaccaagacaaaatttgaagaaacaaaagaaaatgcggatggtgaaaacttg
gaggatcaatgtgctgctttgggatcattagctttaattaaggatgattcttgtagaaag
agtaaaactgttgtgaaagctgaactcagtgctcaaaaggtgccttcagcttcagttctt
cccctcactggttccaatatcagtactgttgacgctgaaagggaaattcaggttgcgaaa
gaatctatatcaggtgtatcaatgcccaaatcctctcttaaatcatcaggttcaaagaag
gttggtctctctgtcacgtgggcagatgagaaaattgacggttgtggcagtagagacctt
tttgaagttagagatatgggtgatgatggtaatgataataatgctgatgacatgttacgg
tttgcgtctgctggagcctgtgcgatggcattgagccgagtagcagaagctgttatgtct
ggagattctgatgttgctgatgctgtgtctgaagctggagttattatattaccaagtcca
cgcgatgggcatgaaggggagtcaatggaggatcctgatgtgcttgagccagaagcagct
ctcttaaagtggccaagtaagccggggattccacgttctgaattgtttgaccctgaggat
tcgtggtatgatgaaccaccagaggggttcagcttgacgttgtctccttttgcaaccatg
tggatggcaatcttcgcttggatatcatcgtcttctttggcttacatttatgggagggat
gaaagtttccatgaagaatatttatcagttaatggaagggaatattcccagaagattatt
atgggagacggtcactcttctgcaattaagcaaactctttctggttgtcttgctcggact
tttcccgcacttgttgctgatctcaggctgcgtattccagtatctactttggagaaggga
ctggaaggcttgttgaatacaatgtcttttattgatccacttccagcattcaaagtgaag
cagtggcaagtgattacagttctcttcctggatgctctctccgtatgtaggatccctgct
cttactccacatatgactaatcgaaccatgttgcttcgcaaggtgttggatggcgctcaa
ataagtgcagaagagtatgaagttatgaaggattttttaatgccgcttggccgagcacct
cagttctcatcacaatctggtgcttaa
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