Citrus sinensis (Valencia orange): 102631170
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Entry
102631170 CDS
T02983
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102631170
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
102631170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
NPIP
Myticin-prepro
Motif
Other DBs
NCBI-GeneID:
102631170
NCBI-ProteinID:
XP_006481205
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All DBs
Position
6:join(18051143..18051307,18053625..18054587)
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AA seq
375 aa
AA seq
DB search
MEQELVELFDAAKKAADSAAIDGVSSGGPEVSRCVDALKRLKSFPVTYDVLVSTQVGKRL
RPLTKHPREKIQIVASNLLDIWKKIVIEETTRNKKNGSTGNKSSVTTGVVKPDSGKIDKV
QKTSAVKVEKVSTAETVKVEKTGSVSRSETVKVEKKETNGDSVMDRGEAVKVEKIIEEEQ
APSVRKPSQGTIATPKLTQLIKCNDSSRDKIRELLANALSKVASEADEEIIDEVNACDPI
RVAVSVESVMFEKLGRSTGAEKLKYRSIMFNIRDEKNPDLRKRVLLGEVKPERLVTMSPE
EMASDERQRQIENIKEKALFECQRGGEATATTDQFKCARCGQRKCTYYQMQTRSADEPMT
TYVTCVNCSKRWKFC
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagaactggtggagctatttgacgccgcaaagaaagcggcggactcggcggcc
attgacggagtgtcgtccggtgggcccgaggtgtcgcgatgtgtcgacgccttgaaacgg
ctcaagtcttttcccgttacgtatgatgtgctcgtctccactcaggtcgggaagaggctt
cgacccctcaccaaacatccaagagagaagattcaaattgtagcctctaacttgctcgat
atttggaagaaaatagtcattgaagagacaaccagaaataagaaaaatggcagcactggc
aataaatcttcagttacaactggggttgtgaagccagattctggcaaaattgataaggtt
cagaagacaagtgcagtaaaggtcgaaaaggtgtcaactgcggaaactgtcaaggttgag
aaaactgggagtgtttcaaggtcggaaactgtgaaggtggaaaagaaggaaacaaatggg
gattctgtcatggatcggggggaggctgtcaaggttgaaaagataattgaggaggaacaa
gctcctagtgtaagaaaaccatcacaaggtacgattgcaaccccaaaactgacccaattg
atcaaatgtaatgactcttcgcgtgacaaaattcgggaacttcttgcgaatgccttgtcc
aaagttgccagtgaggctgatgaggaaataattgatgaagttaatgcatgtgacccaatt
cgagttgctgtttctgtggaatctgtaatgtttgaaaagttagggcgctctactggtgca
gagaaactcaagtatcgatctattatgttcaacatccgtgacgagaaaaaccctgattta
agaaaaagggttcttcttggagaggtcaaaccagagaggcttgtcaccatgagcccagaa
gaaatggcaagtgatgagagacaacgccagattgagaatattaaagagaaggctttgttt
gagtgtcaacgtggtggtgaagcgactgccacaactgatcaatttaagtgcgctagatgc
ggacaacgtaaatgcacttattatcagatgcagactaggagtgcagatgaacctatgaca
acgtatgtaacatgcgtgaactgcagcaagcgttggaagttctgctaa
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