Citrus sinensis (Valencia orange): 102631209
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Entry
102631209 CDS
T02983
Name
(RefSeq) single-strand DNA endonuclease 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cit03400
]
102631209
DNA repair and recombination proteins [BR:
cit03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102631209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
C2_DCK_4th
Chromo_2
Motif
Other DBs
NCBI-GeneID:
102631209
NCBI-ProteinID:
XP_006490372
LinkDB
All DBs
Position
9:complement(join(2522766..2523258,2523423..2523654,2524107..2524189,2524427..2524526,2525082..2525250,2525375..2525434,2525610..2525683,2525764..2525836,2525998..2526049,2526578..2526705,2526799..2526860,2527334..2527491,2527593..2527660))
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AA seq
583 aa
AA seq
DB search
MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVNKSYRPQTDKLFLRGLFHR
LRALIALNCGLIFVSDGSIPAIKLSTYRRRLNSGSEVTQDDKNLDKMSSLRRNMGSEFSC
MIKEAKALGLSLGVPCLEGVEEAEAQCALLNLESLCDGCFSSDSDIFLFGARTVYRDIWL
GERGYVVCYEMDDIERKLGFGRNSLITLALLLGSDYSQGVRGLGPESACQIVKSVGDNVV
LQRIASEGLSFVKRAKNSKKEGWSFKCNNKEESLNQEINVNGTDHSLQRETPFSQVIDAY
SNPKCYSADSEAVHRVLAQHLFQHARLHQVCVQFFQWPPEKTDEYILPKIAERDLRRFAN
LRANTLALGVDLPLQKVPVKCPITGIIKSRKLQGKECFEVSWEESYGLKSSVVPADLIES
ACPEKIVEFEERRALRQPKKSKPKSSAAEIDQKLQALMLDIESENSTSSNASFSSRVVMS
EDWTAATEIDLTRRQDLLLDAESKSNANMSCYPTGSTAAKAEIIDLVSPSPVQCRNVSRI
REMSDQPINTIELSDSETEKSPELERKARALRMFIASIRDDIS
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaagaatctgtgggatattctagaatcatgcaagaaaacacttccacttcac
catctccagaacaagagggtatgcatagatctgtcgtgctggatagtgcaacttcaaaac
gtgaacaaatcttataggccgcaaacggacaagctctttctgaggggtctctttcaccgc
ctcagagctctcattgctttgaattgcggcctcatcttcgtttccgatggatcgatacct
gccatcaaattatccacttacagacggcgtttaaattcaggatcagaggttactcaggat
gacaagaacttggataagatgtcatctttaagaagaaatatgggatctgagttctcttgc
atgattaaagaggcaaaagcgcttggattatcattaggcgttccttgcttggaaggggtt
gaggaagctgaagcacagtgtgcattgttaaacctagaatcattatgtgatggatgtttc
tcatcagattcagatatatttctttttggtgcaaggacagtgtacagagacatttggctt
ggtgagagaggctatgttgtttgttatgaaatggatgatatagagagaaaacttgggttt
ggaaggaactcattgattactctagcactacttcttggcagtgattattctcagggagtt
cgtggtctgggtccggagtcagcatgccagattgttaaatctgttggagataatgttgtt
cttcaacgaatagcatcagaggggctatcttttgtcaagagggccaaaaattcaaagaaa
gagggatggtctttcaagtgcaataacaaggaagagtctttgaatcaagagatcaatgta
aatggaactgatcattctttacaaagggagactccgttttcacaagtgattgatgcatat
tcaaacccaaagtgctactcagcagactctgaggcagtccacagggttcttgctcaacat
ctatttcagcatgccagacttcaccaagtatgtgtacagttctttcagtggcctcctgaa
aagacagatgagtatatccttcctaaaattgctgaaagagatttacgtcgatttgccaat
ttgcgggcaaatacattagcgctaggggttgatcttccgctacagaaggtaccagttaag
tgccctataacaggaattattaagtccagaaaacttcaagggaaagaatgctttgaggtc
tcatgggaagaatcatatggacttaaatcttctgtggttccagcagatctaatagaaagc
gcttgtcctgaaaaaattgtggagtttgaggagagaagggctcttagacaaccaaagaaa
tcaaaacccaaatcttctgctgctgaaattgatcagaaactccaagctttgatgcttgac
attgaatcagaaaacagcacatcaagtaatgcatccttttcgtcaagagtagtgatgtca
gaagactggactgctgctactgaaattgatttgacaaggcggcaagacctgttgcttgat
gcagaatcaaaaagcaatgccaacatgtcttgctatcctactggttcgactgctgccaaa
gctgagatcattgaccttgtgagcccttcaccagtgcagtgccgaaatgtttccagaatt
agagaaatgagtgatcagcctattaacacaatagaattaagtgattcagaaactgaaaag
tcacctgagcttgagaggaaggcaagagcgcttagaatgttcattgccagcattagagat
gacatttcttaa
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