Citrus sinensis (Valencia orange): 102631242
Help
Entry
102631242 CDS
T02983
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cit04131
]
102631242
Membrane trafficking [BR:
cit04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102631242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
102631242
NCBI-ProteinID:
XP_024954650
LinkDB
All DBs
Position
3:join(5586429..5588330,5588531..5588851,5589435..5589554,5589638..5589760,5589920..5590090,5590544..5590669,5590753..5590887,5591303..5591430,5591509..5591617,5591698..5592015,5592126..5592281,5592409..5592707,5593370..5593856)
Genome browser
AA seq
1464 aa
AA seq
DB search
MASNPPQFQVEDQTDEDFFDNLVNDEDDFVGPTKTPIATNITTSSTSTSAVNDKFTVDSN
DSDSDDAKAFANLTIDDGGIDSRQKVATESIGEKKSEPDDSIEDIGTESIAENKSKWNGW
EQNFGTELNLDDKSDLVAGRLDESNNEGDAKDGMDPVPHKNNGSMVREVGWNSFYADRTE
QNGNHGFGSYSDFFSDLGENSAEFPGKVEGNANVALSENGEAKILSRNEESKTGSLLGNS
IDYGNYAQYQESQVYGAEQNANGHDLNSTEYWESMYPGWKYDANTGQWYQVGATANTQQG
SSDTTFGSDWNVISEKSELAYLKQNSQSIVGTVSETSTTESVSNWKSQVSQVDNNGFPEH
MIFDPQYPGWYYDTIAQEWRALESYNSSEQSIVQSHDQQSQNGFTSADAYFNNSNSIYGE
FGQANDYGSQGDGIQSLHDKQADNYGSQGLGNLNQNGSWAESYGNYNQQGLNMWQPKVDA
NAMSVSNFRQNQPVDNFYGSKASLNSHVDQQNAFSSMRSIPSYDKASQGHGVEAKGISGF
QNFVPSGDFSQQLNQAYTKQNEQMQHSNDLYGSQNKVTVPRQSLQSDYQNSYAPNIGRSS
AGRPPHALVTFGFGGKLVVMKDNSSLQNSAFGNQGHVEASISVLNLMEVVLGNTDASSTG
TGAFGYFRALCQQSCPGPLVGGSVGSKELNKWIDERIANCESLDMDYRKGEALKLLLSLL
KIACQHYGKLRSPFGTDATLRESDTPESAVAKLFASAKMNGTQFGALNHCLQNLPSEGQI
RATASEVQNLLVSGRKKEALLCAQEGQLWGPALILASQLGEQFYVDTVKQMALRQLIAGS
PLRTLCLLIAGQPADVFATEVPAVNGFPGAVTMPQQSTNFGDNCMLNDWEENLAVITANR
TKDDELVIIHLGDCLWKDRSEITAAHICYLVAEANFEPYSDSARLCLIGADHWKFPRTYA
SPDAIQRTELYEYSKVLGNSQFSLLPFQPYKLIYAHMLAEVGKVSDSLKYCQALSKSLKT
GRAPEIEIWKQLVSSLEERIRIHQQGGYTANLAPGKLVGKLLNFFDSTAHRVVGGLPPPA
PSASQGTGQSNEHDYQPMGNRVSGSQSTMAMSSLIPSASMEPISEWAADGNRMTVPNRSV
SEPDFGRTPRQHQVDSSMEATSSSAEGKASGSGGTSRFSRFGFGSGLLQKTVGLVLRPRA
DKQAKLGEKNKFYYDEKLKRWVEEGAEPPAEEAALAPPPTTAAFQNGTSDYNLQYALKSE
GSSSNGSPIIRSSPPSEQTSGIPPIPTSTNQFSARGRMGVRSRYVDTFNQGKASPAKSFQ
SPPIPSVKPAATANAKFFVPAPPSPAEQPMEAIAENVPEESATGEKPSTSIMNDSFQPPA
SSMTKQRSPSMDNIPGGSMTRGNSPLPPHTRRTASWSGSFPDGLNPNLRETRPLGEAMGM
PPSSFLPSPISGGSVGDELHEVEL
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccgcagtttcaggtggaggatcagacggacgaggactttttcgat
aatttagttaacgacgaggacgatttcgttggccccaccaaaacccccatcgcgaccaac
atcaccacctcctccacctccacatccgccgttaacgataaatttacggttgactccaat
gactctgattctgacgatgcgaaagcttttgcaaatctgactatagatgatggcggaatt
gattcgagacaaaaagttgccacggaatcgattggggaaaagaagagtgagcctgatgat
tcaatagaagatattggtacggagtcaattgctgaaaataagagcaagtggaatggttgg
gaacaaaacttcggtacagaattgaatttggatgataagagtgatttggttgctggtcgt
ttggacgaatcaaataatgagggtgatgcaaaggatgggatggatccggttcctcataag
aataatggatccatggttagggaggttgggtggaattcattttatgcagatcgaacggag
cagaatgggaatcatgggtttggttcgtattcagattttttcagtgatttgggggagaat
tctgcagagttccctggaaaagtggagggaaatgcaaatgtggctcttagtgaaaatgga
gaagctaagattctatccagaaatgaagaatctaaaacaggttcactgttagggaactcc
attgattatggtaattatgctcagtatcaagagagtcaagtttatggggctgaacagaat
gcaaatggtcacgatttgaatagtactgaatattgggagagtatgtatccgggatggaag
tatgatgcaaatacagggcaatggtatcaggtgggtgcaacagcgaacactcaacaaggg
agctctgatacaacttttggtagtgattggaatgttatttcagagaaatcagagcttgcg
tacttgaagcaaaattctcagtctattgtggggacagtttcagagacgagtacaactgag
agtgtgtccaattggaagagtcaggtttctcaagtggataataatggtttccccgaacat
atgatttttgatcctcaatatcctggttggtattatgatacaattgctcaagaatggcgc
gcattggagagttataattcatcagaacaatctatagttcaatctcatgatcagcagagt
caaaatggattcacttctgcagatgcgtatttcaataatagtaacagtatttatggtgaa
tttgggcaggctaatgattatgggtctcaaggtgatggtatccaaagcctacatgacaag
caagctgataattatgggtctcaaggccttggcaacctaaatcaaaatggaagttgggct
gagtcttatggtaattacaatcagcagggtttaaatatgtggcaacccaaggttgatgct
aatgctatgtctgtttcaaattttcgtcaaaatcagccagtggataatttttatggttcc
aaggcttctttaaacagccatgtggatcaacagaatgctttcagttctatgcggtctatt
ccatcatatgacaaagcaagtcaaggtcatggtgttgaagctaaagggatttctgggttt
caaaactttgtgcccagtggggactttagtcagcagttgaatcaggcatatacgaagcag
aatgaacaaatgcagcactcaaatgacctctatggcagtcagaacaaagtaactgttcca
cggcaatcacttcagagtgattatcagaattcttatgctccaaacattggaagatcatct
gctgggcgtcctccacatgcattggttacttttggttttggtggaaaactcgtagtaatg
aaagataacagttctcttcagaactcagcttttggaaaccagggtcatgtagaagcatcc
attagtgtgctgaacttgatggaagtagtgctgggaaacactgatgcttctagcactgga
acaggtgcttttggttactttcgtgctctgtgccaacaatcttgtccaggtccattggtt
ggtggaagtgttggaagtaaggagttgaataagtggatcgatgagaggattgctaactgt
gaatctcttgacatggattataggaagggtgaagcattgaagttgcttctctcattactt
aaaatagcttgtcagcattatggaaaacttcgatctccttttggcactgatgctacatta
agggaaagtgataccccagaatcagcagttgctaaactttttgcatctgccaagatgaat
ggcacacagtttggtgctcttaaccactgcttgcaaaatttgccatcagaaggacagatt
cgggcaactgcttctgaggtgcagaaccttctggtctctggtcggaaaaaggaggctctt
ttatgtgcacaagaaggtcagctgtgggggcctgcacttatccttgcatcacaacttggc
gaacagttttatgttgatactgtgaagcaaatggcccttcggcagctgatagcaggatct
cctctgcggacattatgcttgcttatagctgggcaaccagcagatgtgtttgccacagaa
gtgccagctgttaatggttttcctggtgctgttactatgccacaacagtccacaaacttt
ggagacaattgcatgctcaatgattgggaggaaaatttggctgtgataactgcaaataga
acaaaagatgatgaactcgtgattattcatctcggagattgcttatggaaggacagaagt
gagatcactgctgctcacatctgctatttagttgctgaagcaaactttgagccatattca
gatagtgcgagactttgtcttattggagcagatcactggaaatttcctcgaacatatgct
agtccagatgctattcagaggaccgagttatatgaatattcaaaggtgcttggaaactct
cagtttagcctgctaccctttcagccatataagctcatatatgcacacatgctcgctgaa
gtggggaaggtttcagattctctaaagtactgtcaagctttatcaaaatcactgaaaact
ggccgagcccctgaaattgaaatatggaagcaattagtatcatctcttgaggagaggatt
agaatccatcaacagggtggatacacagcaaatctggctcctggaaaattagttggcaaa
ttgctcaacttttttgatagtactgcacatcgtgttgttggcggtctaccaccgcctgca
ccatccgcatctcaaggaactggtcaaagtaatgaacatgattaccaacctatgggcaat
agagtatcaggtagtcagtcaacaatggctatgtcatcattaataccttctgcttctatg
gagcccatcagtgagtgggctgctgatggcaacagaatgacagtgcctaatagaagtgtc
tcagagccagactttggtagaaccccgagacagcatcaggttgattcgtcaatggaagca
acctcatctagtgcagaaggcaaagcatcaggctcaggtgggacatctcgcttttctcgt
tttggatttggctcagggcttttgcagaagacagtggggctggtcttaaggcctcgagcg
gataaacaggctaaattgggtgaaaagaacaagttctattatgatgaaaagcttaagaga
tgggtagaggaaggtgctgaacccccagctgaagaagctgccctcgcaccccctccaaca
accgcagccttccagaatggaacgtctgactacaacttgcaatatgcattgaagagtgag
ggttcttcaagtaatgggagcccaataatcagaagttcacctccttcagaacaaacttca
ggcatacctcctattccaacaagcacaaatcagttttcagctcgtggacgtatgggtgtt
cgatcaaggtatgtcgacaccttcaaccaaggtaaagcaagcccagcaaaatcattccaa
tcacctccaattccatctgtgaaaccagctgcaactgcaaatgcgaagttttttgtacct
gccccgccatcaccagctgaacagccaatggaggctattgcagaaaatgttccagaagag
agtgcaactggtgagaagccttcaacatccattatgaatgactctttccaacctcccgca
tcatcaatgacgaaacaaaggtccccaagcatggataatatcccaggtgggtctatgaca
agagggaatagcccccttccgcctcatactaggcggacagcttcatggagtggaagcttt
cctgatggattgaatccaaatttgagagaaacaagacctttaggtgaggcaatgggcatg
cctccatcatcatttttgcctagtccaattagcggtggcagtgttggggatgagcttcat
gaggtggaactttga
DBGET
integrated database retrieval system
