KEGG   Citrus sinensis (Valencia orange): 102631283
Entry
102631283         CDS       T02983                                 
Name
(RefSeq) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03013  Nucleocytoplasmic transport
cit04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102631283
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102631283
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102631283
   04131 Membrane trafficking [BR:cit04131]
    102631283
Messenger RNA biogenesis [BR:cit03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102631283
Membrane trafficking [BR:cit04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    102631283
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    102631283
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    102631283
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR3_2nd Beta-prop_RIG_2nd Beta-prop_Vps41 WDR55 ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 EIF3I Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_WDR41 NBCH_WD40 Beta-prop_WDR36-Utp21_2nd WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 102631283
NCBI-ProteinID: XP_006465678
UniProt: A0ACB8JB94
LinkDB
Position
7:8823946..8824851
AA seq 301 aa
MPPQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWE
VAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLA
CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCS
GGCDNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIW
TVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAVG
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgccacctcaaaagattgaaactggtcatgaggacacagtacatgatgtggcgatggat
tactatggcaagcgcctcgccacggcatcttcggattactcaattaagatcattggtgtg
ggcaataacacctctcagcatctcgcaaagcttagtggtcataaaggtgctgtttgggag
gtggcttgggctcacccaaaatttgggtctatacttgcatcctgttcttttgacgggact
gtcataatatggaaggagggtaacagtaatgagtggatcaaagatcatgtttttgaggac
cacaaatcgtcagtcaattcgattgattgggcgcctcatgagctcggtctatgtttggct
tgtggttcgtcagatgggaacatatcagtttttacggctagagctgatggcggctgggat
acatctaggattgaccaagctcatccggttggtgtgacttcagtttcatgggccccatca
acagctcccggtgcacttgtgggttctggttttcttgacccagttcagaagctttgttca
ggtggttgtgataataccgtgaaggtgtggaagctgtacaatggaatttggaagatggac
tgctttccagctcttcaaatgcatactgattgggttagagatgttgcttgggctcccaac
ttggggcttccaaaatctactattgcaagtgcatcggaggatgggaaagttattatatgg
actgtggccagggaaggagatcaatgggaaggtaaggtgttgcatgacttcaagacccct
gtttatagagtcagctggtcactgactggaaacatattggctgtggctgatggaaacaac
aatgtaacactgtgggaagaagcagtggatggggagtggcgacaggtgactgcagttggg
ccgtaa

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