Citrus sinensis (Valencia orange): 107174341
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Entry
107174341 CDS
T02983
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
107174341
Spliceosome [BR:
cit03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107174341
Other components
Complex C specific factors
107174341
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
Motif
Other DBs
NCBI-GeneID:
107174341
NCBI-ProteinID:
XP_052291175
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Position
2:join(22698004..22698124,22698376..22699964)
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AA seq
569 aa
AA seq
DB search
MIMDAHKTQERVGSIGGRCFFDSNNTTRISSQRPKPLASPDGNGMIPTRFPVNDLRDGMY
KGPGVDVGPGSGLGFKGSRFWDIESEADPQYRAGGGLGIGKNQPPWMMGLGLEEMEERLW
SKQWKMKKIDWQACAGVTGLAMLKNGTKAQLAGNDGSRIKKETAFCLQRNKDKFDKMRAA
EKQKFDDAETVLNTLDQIQKKNSLGTLTLESLANDFSNLKCKVSHSYMIYHLSPVAYSLA
FPLFIRTFQGWDPLQNPSYQLELVSMWRQVLDSDHGYVYYAQLVSQAILPAVRASSISNW
DAKDPEPMLKFLDCWKMLLPYSLLNTILDTIVMPKMSDVVDSWDPRSETYSIHDWVHQWL
PWLGRKQKGLFRMILIKLGEVLDAWHPSDASAYILLSPWKNVLWEQLMHRYIVPKLQVTV
QELEINPANQKLYQFHWVMSWASAIPSHLMVNLMSGFFFTKWLQFLYNWLNKTPDFEEIR
KWYKVWKDLLPQELVANESIRAQLSIGVDMIGKAVDGVKIDPPAHSLNYSLPGMRSLKPW
LFEAPQTRRAPAQNYQAFEAGLYPCWSCY
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggacgctcacaagacgcaggaaagagtcggttcgattggaggcaggtgcttc
tttgactccaacaacactactcgcatttcatcccaacgaccaaagccactcgcgtcacct
gatgggaatgggatgatacctacacgctttcctgtgaatgatttgagagatggcatgtac
aaggggcctggtgtggatgttggtcctgggagtgggctaggattcaaaggcagtaggttt
tgggatattgaaagtgaggctgatccccagtatagagctggtggtgggcttgggattggg
aagaaccagccgccatggatgatgggattaggcctggaagagatggaagagaggctttgg
tcgaaacagtggaagatgaagaagatcgattggcaggcttgcgcaggggtcacgggtctg
gctatgcttaaaaatggaaccaaggctcagctggctggtaatgatggttcgaggataaag
aaagagacggcattctgcttacaaagaaacaaggacaagtttgataaaatgagagcagca
gagaagcagaagtttgatgatgctgagactgttcttaatactttagaccaaattcagaag
aagaattctttaggaacattgacattggagtcacttgcaaatgattttagtaacttaaag
tgtaaggtttcccatagttatatgatctatcacttgtcccctgttgcttattcattagct
tttcctttatttataagaacctttcaaggttgggatcctcttcaaaatccatcatatcaa
ttggaactggtatcaatgtggagacaagtgttggacagcgaccacggttatgtctattat
gctcagctggtttcgcaggccatcttaccagctgtgagagcatctagcatcagtaactgg
gatgctaaagatcctgagccaatgcttaaatttttggattgttggaaaatgttgttgcct
tattcacttcttaataccatattggatacaattgttatgccgaaaatgtcagatgttgtc
gactcgtgggaccctcgtagtgaaacttattcaatccatgattgggtgcatcaatggctg
ccatggttgggacgaaaacaaaagggcttgtttcggatgatacttataaagttgggtgag
gtgcttgatgcttggcacccaagtgatgcatctgcttacattttgttgtcaccttggaag
aatgtgttatgggaacaacttatgcatcgatacatagttccaaaactgcaggttactgta
caagaattagaaataaatcctgcaaaccagaagctttatcagttccattgggtcatgtcc
tgggcctctgccattccaagtcacctaatggtaaatctaatgtcggggttcttcttcacc
aagtggcttcagtttttgtataactggttgaacaaaacgccagactttgaagagatccgg
aaatggtataaggtttggaaggatcttcttccgcaagaattagtagcaaatgaaagtatc
agggcccagcttagtatcggcgttgacatgatcggcaaagctgttgatggtgttaaaatt
gacccgcctgctcattcactgaactatagtctacctgggatgaggagcctgaagccctgg
ctgtttgaggctccacagacacggagagcaccagcacaaaattaccaagcatttgaagca
gggttatacccgtgttggtcatgttactga
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