Citrus sinensis (Valencia orange): 112497668
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Entry
112497668 CDS
T02983
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
112497668
Enzymes [BR:
cit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
112497668
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Gene cluster
GFIT
Motif
Pfam:
CBM-like
Rhamnogal_lyase
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
112497668
NCBI-ProteinID:
XP_052297437
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Position
5:join(30973704..30973795,30973874..30973993,30974144..30974258,30974710..30974880,30975001..30975156,30975351..30975457,30975563..30975653,30975762..30975903,30976572..30976725,30976864..30976980,30977136..30977502)
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AA seq
543 aa
AA seq
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MRTKEQVELSFTRMWHPSTNGTIAPVNIDKRFLMLRGSSGFYSYAIYKRLKGWPGFQLFN
NRMVFKPNPDKFHYMIISGNRQREMPLQQDRERGHKLAYEEAVLLPNGEVDDKYQYSMDA
KDIRVHGWISTDSTVGFWQILPSSESRSFGPLKQFLTSHTGPISINTFHSTHYVGENFGM
NFKDGEAWKKIFGPFFVYVNSVPGKGDRQMLWRDANRQFMNEVKSWPYKFPASKDFARSN
KRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSI
KNVLIGNYNLYAWIPGFIGDFKYHAAIRITAGSAKQIGNLVYKAPRNGPTLWEIGIPDRS
AAEFYIPNPNPKYINKLYVKHDRFRQYGLWERYAELHRKRDLVYEVWANNYRKDWYFAQN
TRKKGNKYEGSTWQIQFKLEGVVKKATYKLRVAVAAAHGAELQVRVNSRSARRPLFSSGS
VGRENAIARHGIHGVYKLFNVDVPGKVLRKGNNTIYLSQPRKLDAFTGIMYDYLRFEGPD
PNS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactaaagaacaagtggagctctcattcaccaggatgtggcatccctctactaac
ggcaccatagctccggtgaatatcgataaaaggtttttgatgcttcgaggatcatcgggg
ttttactcttatgccatttacaagcgcctgaagggatggcccggtttccagctttttaat
aataggatggtgttcaagcctaatccagacaagtttcactacatgataatatctggcaat
cgccaaagggaaatgcctctacaacaagaccgggaaagaggccataagctggcctatgag
gaggcagttttgcttcctaatggggaggtggatgacaagtatcaatactcaatggacgca
aaagatattcgggtccacggatggatatccaccgactccaccgtcggattctggcaaatc
ctacccagtagtgaatcccgatcatttggacctctcaaacaatttctaacttctcataca
ggccccatcagcatcaatacttttcacagcacgcattacgttggagagaattttggaatg
aattttaaagatggggaagcttggaagaaaatttttggtcccttttttgtttacgttaat
tctgtaccgggtaaaggggaccggcaaatgctatggagggatgccaatagacagtttatg
aacgaagttaaaagctggccgtacaaattcccagcttcaaaagactttgcaagatcaaat
aaacgaggtagtatcagcggtagattaattgtcaaagacagatatgttagtcgtgcgggc
atagccgcaaaaggtgcttacgtgggtttggcaaagccaggcagggctggatcttggcaa
acagaatgcaagggttatcagttttggactgttgcaaacgaggggggaaatttctccatt
aaaaatgtgttgattggcaactataatctttatgcatggatccctggtttcattggggat
ttcaaatatcatgctgccattagaataaccgcaggttctgcaaaacagattggcaatctc
gtatataaggccccgagaaatggacctacattatgggagataggcatccctgatcgatca
gctgcagaattttatattccaaatcctaatccaaagtatatcaacaagttatatgttaaa
catgacaggtttaggcagtacggactatgggaaagatatgcagaattacatcgcaagcga
gatttggtctatgaagtttgggctaataattacagaaaagattggtattttgcgcaaaat
accaggaagaaaggtaacaaatacgaaggaagcacatggcaaatacaattcaaactggag
ggagtagttaaaaaggcgacatataagttgagagtggcagtggctgccgcacatggcgct
gagttgcaggttcgagtaaactctcgctcggcacgccgtcctttattttcaagcgggtcg
gttgggagagaaaacgcaattgcgaggcatggaatccatggggtgtataagctgttcaat
gtcgatgtgccggggaaggtgctaaggaaaggaaacaacaccatttatctttctcagcca
agaaaattagatgcttttacaggaatcatgtatgactatctccgttttgaagggcctgat
ccaaattcataa
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