Citrus sinensis (Valencia orange): 127898595
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Entry
127898595 CDS
T02983
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127898595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cit04121
]
127898595
Enzymes [BR:
cit01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127898595
Ubiquitin system [BR:
cit04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
127898595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
Motif
Other DBs
NCBI-GeneID:
127898595
NCBI-ProteinID:
XP_052293694
LinkDB
All DBs
Position
3:join(47767411..47767635,47768699..47769085,47769754..47770116)
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AA seq
324 aa
AA seq
DB search
MELHSIECVPSSDLTDEDEIHHHRPHQFPSISKPHNNCNNNNTSLASVINPGTTSVHELL
ECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPC
KYMSLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSIVGDIPFLVAHLRDDHKVDMHS
GCTFNHRYVKSNPHEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETE
ARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKL
RVTGRIWKEQQSPEGGACIPNLCS
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcatagcattgaatgtgtgccatcctcagatttgactgatgaggatgagatc
catcaccatcgcccccatcagtttccttctatttcaaagcctcacaataactgcaataat
aataacactagtctcgcttctgttattaatcctggcaccaccagtgtccatgaacttctt
gaatgtccagtttgtactaattcaatgtatcctcctattcatcagtgccacaatgggcat
acgctctgttcaacctgtaaaacaagagtacataatcggtgccccacttgtaggcaggag
cttggtgatataaggtgtctagcattagagaaggtggctgaatcacttgaactaccctgc
aaatacatgtcgcttggatgcccagagatcttcccttattacagcaaacttaagcatgag
gctatatgtaacttcagaccttacaattgtccatatgctggatcagagtgctccatagtt
ggtgatattcccttccttgttgctcatctgagggatgatcacaaagtagatatgcattct
gggtgcactttcaaccatcgctatgtcaagtctaatcctcatgaagtagaaaatgccaca
tggatgttaactgttttccactgttttggccagtacttctgcctacattttgaagctttc
cagctggggatggctccagtgtacatggcattcctccgattcatgggtgatgagacagaa
gccaggaattacacctacagtctagaggttggaggaaatggacggaagcttacttgggaa
ggcaccccacggagcatcagagacagtcacaagaaggttagagacagtcatgatggtcta
attatacagcgtaatatggctctttttttctctggaggggaccggaaagagttgaagctg
cgagttaccggacggatatggaaagaacagcagagcccagaaggcggcgcctgcataccc
aacctctgtagttag
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