Citrus sinensis (Valencia orange): 127898610
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Entry
127898610 CDS
T02983
Name
(RefSeq) flap endonuclease GEN-like 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cit03400
]
127898610
DNA repair and recombination proteins [BR:
cit03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
127898610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
Chromo_2
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
127898610
NCBI-ProteinID:
XP_052294779
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All DBs
Position
3:complement(join(49328968..49329231,49329888..49330360,49330491..49330511,49330770..49330905,49331089..49331335,49331459..49331640,49332380..49332550,49333269..49333442,49333834..49334031))
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AA seq
621 aa
AA seq
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MGVGGKFWDLLKPYARFEGLDFLRDKRVAVDLSYWIVQHETAIKKNSVPKPHLRLTFFRT
INLFAKFGAFPVFVVDGTPSPLKSQARLARFYRFTIDSSTLPVAEEGILVERNQTFLKCV
QECVELLELFGMPVLKAKGEAEALCAQLNSEGYVDACITADSDAFLFGAKCVVKCIRPNT
KEPFECYCISDIEAGLGLKRKHLIAMSLLIGNDHDLNGVQGIGLDTALQFVQNFSEDEIL
NILHKIGNGDIPQYWGDIKSTEDAVSHSDESMPMVKSSHCSFCGHPGTKRAHFKFSCEYC
INDNNEGCLKKPDGFKCNCSLCNKNRKEKEQKKHETWWIKVCSKIALETNFPNDEIVTMY
LCENNGTFTVMGGGIIATDGPSISWGSPMTEMLVDFLVYHQPWQPSYIRQKMLPMLSTIY
LREMATNPVQTLLCGQYEFDSIRRVKIRYGHQSYVVKWKKAASAISGVKYTAPVDSDLHL
EEFMEVDEPNDLLDESSNPQIHVDGDCWFLLTDENMKLVHSAFPKKVDHFLQANERRELK
RKRTSSLRSEESNGKLESPKSKGVQLSITEFYRSAKVQSQEKSGADLAKDSNCQVDRISK
ENRRVSSPNLSKSARRRLLFN
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttggaggcaagttctgggatttattaaaaccctacgcccggttcgaaggtttg
gatttcttgagagacaaacgggtggcagtggatctctcgtactggatcgttcaacacgag
actgcaatcaagaagaacagtgtccctaaaccccatctcaggctcacattctttcgtacc
attaacctattcgccaagtttggtgcgtttccagtctttgttgttgatgggactccttcg
ccattgaaatctcaggcaaggttggcacggttttaccgttttaccattgattcttcaact
ttgcctgtagctgaagaaggcatccttgtggagaggaaccagacatttttaaaatgtgtt
caagaatgtgtggaactgcttgaactatttgggatgcctgttctaaaagcaaaaggagag
gctgaagcactgtgtgcacaattaaatagtgaaggttatgtagatgcgtgcattacagct
gatagtgatgcattcctttttggagctaaatgcgtagtaaaatgcatcaggcccaataca
aaggaaccatttgaatgctactgtatatcagatattgaagctggtcttgggctgaagagg
aagcacttgatagccatgtctcttctgataggaaatgaccatgatttaaatggggtacaa
ggaatcgggctagatacagctcttcaatttgtccaaaatttttctgaagatgagatatta
aatattttacacaaaataggcaatggtgatattccgcaatattggggtgatattaaatct
acagaggatgctgtatcccattcagatgaaagcatgccaatggtaaaatcttctcattgt
tccttctgtgggcatccaggcaccaagagagctcattttaagttttcttgtgaatactgc
attaatgataataatgagggctgcttgaaaaaaccagatggatttaaatgtaattgctcc
ctctgcaataagaatcgaaaagaaaaggaacaaaagaaacatgaaacttggtggattaaa
gtttgcagcaagattgccttggaaacaaatttcccaaatgatgaaattgttacaatgtac
ttgtgcgagaataatggtacctttacagttatgggtggagggatcattgcaactgatggc
ccttctatatcatggggtagcccaatgactgaaatgctagttgatttcttggtttaccat
cagccctggcagccgtcatatattcggcaaaagatgcttccaatgctgtccactatatat
ttgagagaaatggccacaaatccagtacagactttgttgtgtggacaatatgaatttgat
tctattcgtcgtgtgaagataagatatggacatcaatcctatgtggtcaagtggaagaag
gctgcttctgcgatcagtggtgttaagtatacagcccctgttgactctgatttgcatctg
gaagaattcatggaagttgatgaacccaatgatctgctcgatgaatccagtaacccccag
attcatgttgatggagattgctggtttttgctgacggatgaaaatatgaagcttgtgcat
tctgcttttccaaaaaaagtagaccactttttgcaagcaaatgagcgaagagagttgaaa
agaaaaaggacttcaagtttgagatctgaagagtccaatgggaagttagaatcaccaaaa
tcaaagggggttcagcttagtattactgaattttatcgttcagccaaagtacaatcccag
gaaaaatcaggtgcagatttggccaaggattccaattgtcaggttgataggatatcaaag
gagaacaggagagtgtcaagtccgaatctttccaagtctgcgaggcgtcgtcttttgttt
aactaa
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