KEGG   Citrus sinensis (Valencia orange): 127898615
Entry
127898615         CDS       T02983                                 
Name
(RefSeq) uncharacterized protein LOC127898615 isoform X1
  KO
K20476  RAB6A-GEF complex partner protein 1
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cit04131]
    127898615
Membrane trafficking [BR:cit04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Rab associated proteins
    127898615
SSDB
Motif
Pfam: RIC1 Beta-prop_EML_2 ANAPC4_WD40 WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_TEP1_2nd Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 127898615
NCBI-ProteinID: XP_052293043
LinkDB
Position
3:complement(join(50063673..50063759,50063856..50063918,50064543..50064659,50065061..50065138,50065220..50065355,50065451..50065578,50065705..50065746,50065841..50065900,50066452..50066509,50067073..50067255,50067564..50067676,50068364..50068543,50069015..50069068,50069188..50069362,50069437..50069582,50069752..50069947,50070254..50070477,50070563..50070995,50071135..50071550,50071703..50071784,50072378..50072526,50072863..50072970,50073075..50073221))
AA seq 1124 aa
MYMAYGWPQVIPLEQGLCPSSQQIIYFKVNNGLLLIASPCHIELWSSSQHKVRLGKYKRD
SESVQREGENLQAVWSPDTKLIAVVTSSLYLHIFKVQITEKSIQIGGKQPSGLFFIKISL
VLNEQLPFAEKGLSVSNIVSDNKHMLLGLSDGSLYSISWKGEFYGAFELVHSSNDSSVAA
LSHHFPSNGLASVDTSGAFVSDHKFPISSAIIWLELCLPMRLLFVLYSNGQLMSCSVSKK
GLKLAEFIKIDKELGSGDAVCASIAPEQQILAVGTRRGVVELYDLAESASLIRTVSLYDW
GYSMDDTGPVSCIAWTPDNSAFAVGWKSRGLTVWSVSGCRLMSTIRQISLSSISSPIVKP
NQDCKYEPLMSGTSMMQWDEYGYRLYAIEEGSSERVLIFSFGKCCLNRGVSGMTYARQVI
YGEDRLLVVQSEDTDELKILHLNLPVSYISQNWPVQHVAASKDGMFLAVAGLHGLILYDI
RQKKWRVFGDITQEQKIQSKGLLWLGKIIVVCNYIDSSNTYELLFYPRYHLDQSSLLCRK
SLLAKPIVMDVYEDYILVTYRPFDVHIFHVKLFGELTPSTTPDLQLSTVRELSIMTAKSH
PAAMRFIPDQVPRECSLNNHVSTSSDMLAREPARCLILRANGELSLLDLDDGRERELTDS
VELFWVTCGQLEEKTSLIEEVSWLDYGYRGMQVWYPSPGVDPYKQEDFLQLDPELEFDRE
VYPLGLLPNAGVVVGVSQRMSFSACTEFPCFEPTPQAQTILHCLLRHLLQRDKIEEALRL
AQLSAEKPHFSHCLEWLLFTVFDAEISRQNINKNQISIPKRAASFSLLEKTCNFIRNFPE
YLNVVVSVARKTDGRHWADLFSAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQ
YSALRLLQATLDECLYELAGELVRFLLRSGREYEQASTDSDKLSPRFLGYFLFPSSYRRP
SLDKSTSFKEQSPNVASVKNILESHASYLMSGKELSKLVAFVKGTQFDLVEYLQREGRVC
ARLENFASGLELIGQKLQMGTLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRSEVLFDL
FRHDMRLWEAYAITLQSYPAFAEYHDLLEALDEKLSSVVDSAKR
NT seq 3375 nt   +upstreamnt  +downstreamnt
atgtatatggcatacggatggccgcaggtgattccactggagcaaggactctgtccatcg
tctcagcagatcatatacttcaaagttaacaatggattgttacttattgcgtctccttgt
cacatcgagctctggagctcttctcagcataaagtgagattagggaaatacaagagggat
tcggagtcagtgcaaagagagggcgagaatttgcaggcggtgtggagccccgacaccaaa
ttgattgctgttgttacatcgtctttatatcttcatattttcaaggtccagattacagaa
aaaagtatacaaatcggaggaaagcagccttctggtttgtttttcattaagatctctctt
gttctgaatgagcagttgccttttgcggaaaagggtttgtcagtgagcaatattgtcagt
gataacaaacacatgctacttgggctttcagatggatctttatatagtatctcatggaag
ggggagttttatggagcttttgaacttgtccactcttctaatgatagcagtgtggctgct
ttgtcccaccattttccgagcaacggtcttgcttctgtcgacacttcgggagcttttgtg
tctgatcataaatttcccataagctctgctatcatttggctggagctttgcctacctatg
aggttgctatttgttttgtattctaatggacaactaatgtcatgctctgtgagcaagaaa
ggcttaaagctagctgaattcattaaaattgataaagagttgggttctggtgatgctgtg
tgtgcttcaatagctccagagcaacaaatccttgctgtaggtacaaggagaggggttgtt
gagctctatgacttggcagaatcagcatcacttattcgtactgtgtctttatatgactgg
ggatactccatggatgacactggtcctgttagttgtattgcttggacacctgataattct
gcttttgctgttggttggaagtcaagaggacttacagtttggtccgtgtccggatgtcgt
ctgatgtcaacgatccgtcaaatcagtttaagttctatatcctctcccattgttaagcca
aaccaagactgtaaatatgagccattgatgagtggcacctcaatgatgcaatgggatgaa
tatggatataggctatatgcaattgaggaaggatcttcagaacgagttcttatattttcc
tttggcaaatgttgtcttaacagaggggtttctggcatgacatatgctcgtcaagtaatt
tatggtgaagataggttactagttgtgcaatcggaagatactgacgaactcaaaattcta
cacctaaaccttccagtttcttatatctcccaaaattggcctgtccagcatgtggctgca
agcaaggacggaatgttcttggcagttgctggtcttcatgggttaatcttatatgatata
cggcaaaaaaaatggcgagtatttggagatattactcaggaacagaagattcagagtaaa
ggtttgttgtggctggggaagatcattgttgtctgcaactatatcgattcttctaacacg
tatgaactgctcttttacccaagatatcaccttgatcagagctcgttgctatgtcggaaa
tcattgcttgctaaaccaatagtgatggatgtctatgaagattatattcttgtgacctat
cgcccatttgatgtccacatattccatgtgaaattatttggtgaattgacaccttctacc
actccagaccttcagctttctacagtacgagaactttcaatcatgactgcaaagagccat
cccgctgctatgcgttttatccccgatcaggttccaagagaatgttctttaaacaatcat
gtttcaacttcttctgacatgttagcaagggagcctgcgagatgtttgatattgagagca
aatggggagctttcacttttggatttggatgatggacgagaaagagagcttaccgattct
gttgaattattttgggttacttgtggtcaattagaggagaaaacgagtctaattgaagaa
gtttcatggttggattacggataccgaggaatgcaggtttggtatccatctcctggtgtt
gacccttataagcaagaggatttcttgcagttggacccggagttggaattcgaccgtgaa
gtgtaccctctggggcttcttccaaatgcaggtgttgttgtcggtgtttctcaaagaatg
tcattttctgcatgcacagagtttccatgttttgaaccaactccacaagctcaaactata
ttgcattgccttcttcggcatctccttcagagggacaaaattgaggaggcattgcggttg
gctcaattgtctgcagaaaagcctcacttttcacattgtcttgagtggcttctttttact
gtatttgatgctgaaatttcacggcaaaatataaacaagaaccagatctcaatacctaaa
cgtgctgccagcttctctcttttggagaagacttgtaatttcatcagaaattttcctgag
tatcttaatgtggtggtgagtgttgcaagaaaaactgatggtcgacattgggcagacttg
ttctctgctgctggaagatcaacagagttgtttgaggaatgcttccagagaagatggtac
cgcactgccgcttgctatattcttgtgatcgctaaacttgaaggtcctgctgtcagtcaa
tatagtgccttacgtttattacaggcaactcttgacgaatgtttatatgaactcgctggg
gagctggtgagattcttactaagatctggaagggaatatgaacaagcatctactgattct
gacaaactatctcccagatttttgggctattttctttttccttctagttataggaggcca
tctttggataaaagcacctcgttcaaggagcagagtccaaatgttgcttctgttaagaac
atcttagaaagtcatgctagctatttgatgtcaggaaaagaactttccaagcttgttgca
tttgtaaaaggcactcagtttgatttagtggaatatcttcaacgtgaaggacgtgtttgt
gctcgcttggagaattttgcttcaggacttgaactaattgggcaaaagcttcaaatgggc
acactgcagagccggttggatgcagaattccttctggctcatatgtgctctgtaaaattc
aaagagtggatagtggttctggcaactcttttgagacgatctgaggtactctttgatctt
ttccggcatgatatgcgattatgggaagcatatgccatcaccttacagtcttaccctgca
tttgctgaataccatgatctgcttgaagccttggacgaaaagctttcatctgttgtggat
tctgcaaagagatga

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