Citrus sinensis (Valencia orange): 127898699
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Entry
127898699 CDS
T02983
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
127898699
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cit04040
]
127898699
Ion channels [BR:
cit04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
127898699
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
127898699
NCBI-ProteinID:
XP_052292765
LinkDB
All DBs
Position
3:complement(join(49477426..49477735,49477844..49478238,49478319..49478555,49478865..49478976,49479047..49479348,49479440..49479652,49479752..49480322,49480572..49480600))
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AA seq
722 aa
AA seq
DB search
MNTERVKFVRFDDWNSENSYSEQKPSNDDGFYPRVMRPTLSAVMDSIRRGYEMGSERIKS
WKKPLSFRSHVMQSEKKSVSEKRILDPQGPFLQWWNKIFVLSCVIALSIDPLFFYMPVID
GKRKCLGLDKTLEITACVLRSFIDTFYILRIIFQFRTGFIARSSRVFGRGELVDDPKAIA
KRYLMSYFIVDILAILPLPQLVVLIIVPAVKGPVPLVAKEMLKTIIFCQYVPRIARIYPL
YNDVKRTSGILTETAWAGAALNLFLYMLASHIFGACWYLYSIERQDSCWRDVCRKLNDTS
NCTTNLYCGEFHGSNNTLLHGSCPFISPDEIKNSSMFNFGISIDALQSRVVEEHDFPKKF
FYCFWWGLRNLSSLGQNLKTSTFVGEVFFAIFISISGLVLFALLIGNMQKYLESTTVRLE
EMRVKRQDAEQWMSHRMLPENLRDRIRRYEQYKWQETRGVEEEGLLRNLPKDLRRDIKRH
LCWDLLMRVPMFEKMDDQLLDAMCDHLKPVLYTEKSFIVREGDPVEEMLFVMRGNLVSTT
TYGGRTGFFNAVYLKAGDFCGEALLTWALDPQSSSNRPLSTRTVQALTEVEAFSLMADDL
KSVASQFRRLHSKQLQHAFRFHSVQWRTWAACFIQAAWRRHSKKKLAQSLQEAEDRLQDA
LATEAGALTSLGATMYASKFAANLLHPLRLRQNGSSGTRLPQRLLPPLIPQKPAEPDFTA
KD
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgagagagttaaatttgtaaggtttgacgattggaattcagagaattcttat
tcagaacagaaaccatccaatgatgatggattttatccaagagtaatgagaccaactcta
agtgccgttatggatagtattcggagaggatatgaaatgggttcagaaagaattaaaagc
tggaagaagccattgagctttcgttcccatgttatgcaatctgaaaaaaaatctgtctct
gagaagagaattctcgacccacaaggtccatttcttcagtggtggaacaaaatatttgtg
ctctcttgtgtaattgcattgtcaatagatccattgttcttttacatgccagtgattgat
ggcaaaaggaaatgccttggtttggataagactttggaaatcactgcttgtgtccttcgt
tcattcattgataccttttacatactacgcataatctttcaattccgcactgggtttatt
gcccgttcttctcgagtatttggtaggggtgagttggttgatgatcctaaggctatagcc
aaaagatacttaatgtcatacttcattgttgacatccttgccattcttcctctaccacag
ctggtagttttaattatcgtccctgcagtgaaaggcccagttccattggtggcaaaggag
atgttgaaaactattattttctgccagtatgttccaagaattgctcggatttatccactg
tacaatgatgtaaaaagaacttctggcatactcactgaaacggcatgggctggagctgct
ttaaatctctttctttatatgctagccagtcatatatttggggcttgttggtacttgtac
tccatagaacggcaagatagttgctggcgtgatgtatgtcggaagttgaatgatacgagt
aattgtactacgaatttgtactgtggagaattccatggatcaaataatacacttctgcac
ggttcatgtccgtttataagtccagatgagataaagaattcatccatgttcaactttgga
atatctatcgatgctctccaatcaagggtggtggaggaacatgattttccgaagaaattc
ttttactgcttttggtggggtctgcgtaatcttagttccctgggccaaaatctcaaaaca
agcacttttgttggggaggttttctttgccatcttcatatccatttcgggattggtttta
tttgccttacttattggcaacatgcagaaatatctggaatctacaactgtaagattagag
gaaatgagagtgaaaaggcaagatgcagaacagtggatgtcccaccgtatgctccccgaa
aatctgagggacagaattaggcggtatgaacagtataaatggcaagaaacaagaggtgtt
gaggaagagggtttgcttcgtaatctccctaaagatctcagaagagatattaagcgccat
ctttgctgggatctcctaatgagggtgccaatgtttgagaaaatggatgatcaattgttg
gatgcaatgtgtgatcacctcaagccagttctttacacagagaagagcttcattgttcgt
gagggtgatccagttgaggagatgctttttgttatgagaggcaatctagtgagtacgacc
acttatggtggaagaaccggtttctttaatgctgtttatctcaaggctggtgacttctgt
ggagaagcactccttacatgggcattggatcctcaatcatcttccaatcgtcctctttca
actaggaccgtacaagctttaacagaggttgaagctttttctctcatggctgatgacttg
aagtctgttgcctctcagtttcggcgtcttcatagcaagcagcttcagcacgctttcagg
ttccactcggtgcagtggaggacatgggcagcatgctttatacaagcagcatggcgccgg
cacagtaagaagaagcttgctcaatccttacaagaagctgaagacaggctgcaagatgct
ttggcaacagaggctggggctttaacgagccttggtgccaccatgtatgcgtcaaaattt
gctgccaatctattacacccgttgcggttgcggcagaatggttccagtggcactagattg
ccgcagagattactgcctccactaattcctcagaagccagcagagcctgacttcactgcc
aaagattga
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