Citrus sinensis (Valencia orange): 127898788
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Entry
127898788 CDS
T02983
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Module
cit_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127898788
Enzymes [BR:
cit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
127898788
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
127898788
NCBI-ProteinID:
XP_052287234
LinkDB
All DBs
Position
7:complement(join(11466464..11466691,11466796..11466909,11467008..11467116,11467209..11467290,11467555..11467762,11467967..11468158,11468501..11468638,11469416..11469514))
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AA seq
389 aa
AA seq
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MATLGWSRSYPGTMPYNVMNFGAVGNGVTDDSQAFIKAWNAVCGDTSNNPTLQVPQGKTF
LLQPTSFQGPCKSSNLQVQIEGNLIAPEGPSSWKGKDRRSWLYFANVNGFTVNGNGEIDG
QGSQWWKLCSDVGAQHFFANSRPALVFEKCTSFQVSGLKHINSQKNHISLDNCQDATLSN
LHISAPESSPNTDGIDISASQNIHILNSNIATGDDCIAINTGSSQINVTGLTCGPGHGIS
IGSLGKQGEAAAVEEVHVKNCTLNATQNGLRIKTWQGGSGYARKITFNDITLTDVDNPII
IDQFYCPHEQCSNETNAVKISDVSYTGIHGTSITQDAIALNCSRTVGCDNIVLEHIHIAS
SNSKEGTYSTCINAHGKCDDSVPSVGCLK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggctacattgggttggagccgatcgtatcctggaacaatgccttataacgttatgaac
tttggtgctgtgggaaatggagttaccgatgattcccaagcttttattaaagcatggaac
gcggtttgtggagatacatcaaacaatccaacccttcaggttcctcaggggaaaacattc
ttgctgcaacctacaagtttccaaggtccatgcaaatcttccaacctccaagttcagatt
gaggggaatctcattgcacctgaaggaccgtcaagttggaaaggaaaggatcgaaggtct
tggctttacttcgcaaatgtcaatggatttactgttaatggaaatggagaaattgatggc
caaggatcacagtggtggaagctttgctcagatgtgggtgcacaacatttttttgcgaac
tctcgtcccgcattagtatttgaaaaatgtaccagttttcaagtcagtggactgaaacat
atcaacagtcagaaaaatcacatctccttagataactgtcaggatgcaactctctctaat
ctccacatatcagcccctgaatcaagccctaacactgatggcattgacatctctgcctcc
caaaacattcatattctcaacagtaacattgccacaggtgatgattgcattgcaattaac
acgggaagctctcagattaatgtaactgggttgacatgtggtccggggcatggtataagc
atcggaagcctaggaaagcaaggagaggcagcagcagttgaggaagtacatgtgaaaaat
tgtactttgaacgcaactcaaaatggattgaggatcaaaacatggcagggggggtctggg
tatgccaggaagataactttcaacgacattacactcacagatgttgacaatcccatcatc
attgaccaattttactgcccacatgaacaatgcagtaatgaaacaaatgcagtcaaaata
agtgatgtttcttacactggaattcatgggacatcaatcacacaagatgcaattgccttg
aattgcagccggactgttggctgtgacaacatagtgctggagcacatccacatagcttca
tcgaattcgaaggaggggacttattcaacttgcatcaatgctcatggaaaatgtgatgat
tcagtccctagtgttggctgtttgaaataa
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