KEGG   Citrus sinensis (Valencia orange): 127901208
Entry
127901208         CDS       T02983                                 
Name
(RefSeq) ATP-dependent helicase BRM-like isoform X1
  KO
K11647  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127901208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cit03021]
    127901208
   03036 Chromosome and associated proteins [BR:cit03036]
    127901208
Transcription machinery [BR:cit03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     127901208
Chromosome and associated proteins [BR:cit03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    REST complex
     127901208
  Chromatin remodeling factors
   BAF complex
    127901208
   PBAF complex
    127901208
   GBAF(ncBAF) complex
    127901208
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD QLQ HDA2-3 Bromodomain AAA_14
Other DBs
NCBI-GeneID: 127901208
NCBI-ProteinID: XP_052293899
LinkDB
Position
3:complement(join(48796904..48797548,48797785..48798036,48799189..48799731,48799814..48801367,48801691..48801933,48802031..48802234,48802318..48802401,48802476..48802568,48802854..48802940,48803062..48803149,48803481..48803593,48803998..48805335,48805446..48806771,48807948..48808100))
AA seq 2240 aa
MQSGGGPSRNRAASTSSAASPSSSSSAVSTPHLGFDSLQQQQQHQQQQQRQPFQQQILRK
PDGNEAILAYQVGSLPGLMGGGNFASPPGSMQPPQQSRKFFDFAQQHAISQESQNRSQGV
EQQLLNPVHQAYMQYALQAQQKSASVLQSQQQAKLGMLGPASGKDQDMRMGNLKMQELIS
MQSANQAQASSSKNSSEQFVRGEKQMEQPQQQVSDQKGEPKPPSQQTLGGQGMAANIIRP
MQAAQHQQSIQNAAGNQLAMAAQLQAWALERNIDLSQPANASLIAQLIPIMQSRIVANHK
ANESNMGAPSSPVPVSKQQVTSPTIAGENSPHANSSSDVSGQSGSAKARPTVSPSPLGST
TSAAVVNNVNNISLQQFSVHGRDNQVPSRQPVAIGNGLPPIHPPQTSLNMTPGVDQPLPV
KNSSGPENSQMQYLRQLNRSSPQSAIPSSDGSSANNFSSQGGLATQMPQQRLGFTKHQLH
VLKAQILAFRRLKKGEGTLPQELLRAIVPPSLELQQQPAQQQFLPAAVNNQDRVSGKIAE
DQLRHLESNGKDAQAVSSSNVQSLPKEEAYAGDDKAAVSPVGQGMSAVTKEPAPVVVPGK
EEQQAPVSSVKSDQEVECGLLRTQQQSDFPADRGKSVAPQVSACDAVQVKKPAQATTALQ
PKDVGAARKYHGPLFDFPFFTRKHDSVGSTAMVNSSNNLTLAYDVKDLLSEEGLEVLQKK
RSENLKKISGILAVNLERKRIRPDLVLRLQIEQKKLRLLDLQSRLRDEVDQQQQEIMAMP
DRQYRKFVRLCERQRVELMRQVQTSQKAMREKQLKSISQWRKKLLEAHWAIRDARTARNR
GVAKYHERILREFSKRKDDDRNKRMEALKNNDVERYREMLLEQQTSIPGDAAERYAVLSS
FLTQTEEYLYKLGSKITAAKNQQEVEEAANAAAAAARLQGLSEEEVRSAAACAGEEVMIR
NRFLEMNAPRDGSSVNKYYSLAHAVNERVMRQPSMLRAGTLRDYQIVGLQWMLSLYNNKL
NGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHKWLPSVSCIY
YVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESV
LARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPT
HNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIY
DWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSK
DFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSL
EDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHR
IGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQ
YKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHDVPSLQEVNRMIARSED
EVELFDQMDEEFGWIEEMTRYDQVPKWLRASTKEVNATIANLSKKPSKNILFGSNIGVDS
GEIETERKRGPKGKKYPNYKEVDDEIGEYSEASSDERNGYPVQEEEGEIGEFEDDEYSGA
VGAPLSNKDQSEEDGPVCEGGYDYLRPSENTRNNHVVEEAGSSGSSSNSRRLTQIVSPVS
PQKFGSLSALEARPGSLSKRMPDELEEGEIAVSGDSHMDHQQSGSWTHDRDEGEDEQVLQ
PKIKRKRSIRVRPRHTVERPEERSCTDTPLHRGDSSLLPFQMDNKYPAQLRTDTEMKAHG
ESNSLRHDQSEPSSKSRRNLPSRKIANAPKSRASLKTGRLNCMPGHTEDAADHFKESWDG
KIANASGSSNFSAKMSDVIQRRCKNVISKLQRRIEKEGHQIVPLLTDLWKRIETSGYVSG
AGNNILDLRKIDQRVDRLEYNGVMELVSDVQFMLKGAMQFYGFSHEVRSEARKVHDLFFD
LLKIAFPDTDFREARSALSFTGPLSTSVSTPSPRQTTVGQSKRHKIINEMEPGPSPPQKP
PQRGSVPVSEDSRIRVQIPQKESRLGSGSGSSREQSQPDDSPHPGELVICKKKRKDREKS
VVKPRSVSGPVSPPSLGRNIKSPGLGLVPKDMRHTQQTTHQHGWANQPAQPANGGSGAVG
WANPVKRLRTDAGKRRPSQL
NT seq 6723 nt   +upstreamnt  +downstreamnt
atgcaatcgggtggtgggcccagccggaaccgggcggcatctacgtcgtcagcggcgtcg
ccgtcttcgtcatcatctgctgtttcgacgccccacttgggttttgattcgttgcagcaa
cagcagcaacaccaacaacagcagcagagacagcctttccaacaacaaatactaagaaaa
cctgatggaaatgaagccattttagcatatcaagttggaagtctccctggattaatggga
ggggggaattttgcttcacctccaggctccatgcaacctcctcagcaatctaggaaattc
tttgattttgctcaacaacatgctatatcgcaggagagtcagaatagaagtcaaggtgtt
gagcaacaactgctaaatcccgttcatcaagcttatatgcaatatgctttgcaggcccaa
cagaagtctgcttcagttttgcagtctcagcagcaagctaaattgggaatgttgggtcct
gcatctgggaaagatcaagacatgaggatgggaaatttgaaaatgcaggaattgatctcc
atgcaatcagctaatcaggctcaggcatcatcgtccaaaaattcatctgaacagtttgtt
cgtggtgaaaagcagatggaacaacctcagcagcaagtctctgaccagaagggtgaacca
aaacctcctagtcagcagacccttggtgggcaaggaatggctgctaatattataaggccc
atgcaggcagcacaacatcagcaaagcattcaaaacgcagccggtaaccaacttgcaatg
gctgctcagttgcaggcatgggcacttgagcgcaatattgatctctcacagcctgcaaat
gccagcttaatagcacagcttataccaatcatgcagtctagaattgttgctaatcacaaa
gcaaatgaaagcaacatgggtgcgccgtcatcacctgtcccagtatcaaaacaacaggtg
acatctccaaccattgcaggcgagaactctccacatgctaattcatccagtgatgtgtct
gggcaatctggttcagcgaaggcaagacctacagtttcccctagtcctcttggctcaact
accagtgcggctgtcgtcaataatgtaaacaacatttcattgcagcagttttctgttcat
ggcagagataaccaggttccttctagacagccggttgcaattggaaatggattgcctccg
atacatcctccacagacatctttgaacatgacaccgggtgtggatcagcctttgcctgta
aaaaattcaagtggcccagaaaattcacaaatgcagtacctcaggcagttgaatcgatct
tcaccgcaatctgcaattccttccagtgatggaagctcagctaacaacttttcgtcacag
ggtgggctggccacccagatgccacagcagcgtttagggttcacaaaacatcaacttcat
gttcttaaggcacaaattctagcatttaggaggctgaagaaaggagaaggtactctacca
caagagcttcttcgagctattgttccaccgtctcttgagttgcagcagcagccggcacag
cagcaatttcttcctgcagcagtaaataatcaggatagagtttctgggaagattgcagaa
gaccagttgagacatttggaatctaatggaaaggatgcacaagctgtgtcatcatcaaat
gttcaaagcttaccaaaagaagaagcttatgctggggatgataaagcagctgtgtcacca
gttgggcagggtatgtcggctgtgacaaaggaacctgcacctgtggtagtaccaggaaaa
gaagagcagcaggcccctgtatcttcagttaagtcagaccaggaagtagaatgtggtctt
ctgcgaactcaacaacaaagtgatttcccagctgatagaggaaagtctgttgcacctcag
gtttctgcatgtgacgcagttcaagttaagaagccagcacaagcaactactgccctccag
ccaaaagatgttggcgctgccagaaagtatcatggaccactatttgattttccctttttc
actagaaaacatgactctgttgggtcgacagcaatggttaatagtagtaataatctaaca
ttggcatatgatgtcaaagatctactttctgaggaaggcttggaagttctccaaaagaaa
agatcagaaaatttgaagaagattagtggcatattggcagttaatttagagagaaaaaga
atcaggccagatcttgttctgcggttgcagattgaacaaaaaaagcttagacttttagat
ctacagtcacgtttaagggatgaagttgaccaacaacagcaggagattatggcaatgcct
gacagacaatataggaagtttgtccggctgtgtgagcgtcagcgtgttgaactgatgaga
caagtacaaacatctcagaaggccatgagagagaagcaattaaaatccatctcacagtgg
cgtaaaaagcttcttgaggctcattgggccatccgtgatgcacggactgcccggaatcgg
ggagttgccaaataccatgagagaattttgagggagttctcgaagagaaaggatgatgat
cggaacaaaaggatggaagccttgaagaataatgatgttgagaggtatagggagatgttg
ctagagcagcagactagtatcccgggtgatgctgcagaaagatatgcagtcctctcgtca
ttcttgactcagactgaagaatatctttataaactgggaagtaaaataaccgctgccaag
aatcagcaggaagttgaagaggcagcaaatgctgctgctgctgctgcaagattgcagggt
ctttctgaagaagaggttaggtcggcagcagcttgtgctggtgaggaagtgatgatcaga
aatagatttctggaaatgaatgcccccagggatggttcatccgttaacaagtattatagt
cttgctcatgctgtgaacgaaagggtcatgaggcaaccctcaatgttacgagccggaacc
ttacgagattatcagattgttggattgcagtggatgctttctttgtataacaacaaatta
aatggaatattggcagatgagatggggcttgggaagactgtgcaggtgatggcactgata
gcttatttgatggaatttaaagggaactatggccctcatcttataattgtccctaatgct
gtattggtgaattggaagagtgagttgcataagtggctgccatctgtatcatgcatttat
tatgttggtgcaaaggatcaacggtcaaggttgttttctcaggaggtcgctgccctgaaa
tttaatgtccttgtgacaacttatgagttcatcatgtatgaccgctcaaaactgtcaaaa
gttgattggaagtatatcataattgatgaagcacaaagaatgaaagacagagaatcagtt
ttggcccgtgaccttgatagatatcgttgccagaggcgcttgcttcttacagggacgcct
ttacagaatgatttaaaggaactttggtcactcttaaatctacttcttcctgaagtgttt
gataatcggaaagcattccatgattggttttcacaaccatttcaaaaggaaggtcctaca
cataatgcagatgatgactggcttgagactgaaaagaaagttatcattatccaccgactt
catcaaatattggagccttttatgctcagacgccgtgttgaagatgtcgaaggttccctt
ccacccaaggtctcaatagttttaaggtgtagaatgtcagctattcagagtgctatttat
gattggatcaaagccactggtactcttcgggttgatcctgaagatgagaagagaagggtt
caaaaaaatcccatataccaggccaaggtgtataaaactcttaataacagatgtatggag
cttcgtaaaacttgcaatcatcctttgctaaactatccatatttcagtgacttatccaaa
gattttcttgtaaaatcatgtgggaaattatggatcctggataggatccttataaaactt
cagagaacggggcatagagtactgctgtttagcaccatgaccaagcttcttgatatcctg
gaggaatatctacaatggcggcaacttgtgtacaggcgaattgatggaactactagttta
gaagatcgtgaatcagctattgtggactttaatagccatgattcagactgctttatattc
ctgcttagtattcgtgccgctggacgtggtcttaatcttcagtctgctgacacagtcatc
atttatgatcccgatcctaacccaaaaaatgaggaacaggcagttgctagagcccaccgc
attggacagaaaagagaagttaaggtcatttatatggaagcagttgttgacaaaatttcg
agtcaccaaaaagaggatgaactaagaagtggaggtacagttgatttagaggatgatctt
gcaggtaaggatcgatatattggatctattgagggcctcataaggaataacattcagcag
tataagattgacatggctgatgaggtcatcaatgctggacgatttgatcagagaacaact
catgaagagaggcgtatgactttggagacattattacatgatgaggaaaggtaccaagaa
actgtgcatgatgttccatcactgcaggaggtaaatcggatgattgctagaagtgaagat
gaagtagaattgtttgatcaaatggatgaagagtttggttggattgaggagatgacaaga
tatgaccaggtaccgaagtggcttcgagccagtacaaaggaagtgaatgctactattgct
aatttatccaaaaagccatcaaagaatattttgtttggtagcaatattggtgtggattct
ggtgaaattgaaacagaaagaaaaaggggacccaaggggaaaaagtatcctaattacaag
gaagttgatgatgaaattggagaatattctgaagcaagctctgatgagaggaatggatat
cctgtgcaggaagaagagggagaaattggagagtttgaagatgatgaatacagtggtgct
gttggggcaccactgagtaacaaagaccaatcagaagaagatggtccagtttgcgaaggt
ggttatgactatctccggccttcagaaaacacaagaaacaatcatgtagttgaggaagct
ggttcttcaggatcatcttcgaacagtcgaagattgacacagatagtatctcctgtttcc
cctcagaaatttgggtctctgtctgcattagaagctaggccaggttctctttcaaagagg
atgccagatgagttagaagagggagagattgcagtatctggagattctcacatggaccac
cagcaatctggaagttggactcatgatcgtgacgaaggtgaagatgaacaggttttgcag
cctaagatcaaacgaaagcgtagtattcgagttcgaccccgtcatactgttgaaaggcca
gaggagaggtcttgcaccgacacacctctccatcgcggtgattcatctctcttgcccttc
caaatggacaacaaatatccagcacagttaaggactgatactgaaatgaaagcacacggg
gaatccaattctctcaggcatgatcaaagtgagccatcttcgaaaagtaggcggaactta
ccttcacggaaaatagctaatgccccaaagtcgcgtgcttcactgaaaactggtcgattg
aattgcatgcctggtcatacagaagatgctgctgatcacttcaaagaaagttgggatggg
aaaattgcgaatgctagtggttcctcaaattttagtgctaagatgtctgatgtcatccag
aggaggtgcaagaatgtaattagtaagctccaaaggagaatcgagaaagaagggcatcaa
attgtacccctgctaactgatttgtggaagagaattgaaacttctggttacgtgagtgga
gctggaaataatattttggatttacggaagattgatcagcgtgttgacaggctagagtat
aatggagtgatggagctggtgtctgatgtgcagtttatgttaaagggtgcaatgcagttt
tatggcttttcacatgaggttagatcagaagcaaggaaagttcatgatctgtttttcgat
ttattgaagattgcatttccggatacagattttcgagaagccagaagtgcactctctttc
actggcccactatctacctctgtctctacgccgtctccaagacaaaccactgttggccaa
agtaagaggcacaagataataaacgagatggaacctggtcctagtcctccccaaaagcca
ccacaacgtggatctgttcctgttagtgaagacagtaggattagagtccaaataccacag
aaggaatcaaggcttggaagtggaagtggcagtagtcgagagcaatctcagccggatgat
tctccacatccaggggagctggttatctgcaagaagaagagaaaagacagggaaaagtca
gtggtgaagccaagatctgtatctggccctgtctcaccacctagcttgggtcgtaatatc
aaaagtccaggtctaggtttggtacctaaggatatgcgtcatactcagcaaactacccac
cagcatgggtgggccaaccagcctgctcaaccagcaaatggtggtagcggggctgttggt
tgggcaaatcctgttaagaggttgagaacagatgctggcaaaaggcggccaagtcaatta
tga

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