KEGG   Citrus sinensis (Valencia orange): 127901466
Entry
127901466         CDS       T02983                                 
Name
(RefSeq) uncharacterized protein LOC127901466 isoform X1
  KO
K24155  rabconnectin-3a
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit04142  Lysosome
Brite
KEGG Orthology (KO) [BR:cit00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    127901466
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cit04131]
    127901466
Membrane trafficking [BR:cit04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    127901466
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    127901466
   RAVE complex
    127901466
SSDB
Motif
Pfam: Rav1p_C WD40 WD40_Prp19 Beta-prop_EML WD40_WDHD1_1st WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_IFT140_1st EIF3I Beta-prop_TEP1_C
Other DBs
NCBI-GeneID: 127901466
NCBI-ProteinID: XP_052294799
LinkDB
Position
3:join(47914259..47914652,47914922..47917609,47918001..47918436,47919204..47919432,47920322..47920486,47920780..47921052,47921177..47921422,47922027..47922416,47922520..47923953,47924127..47924183,47924744..47925172,47926437..47926660,47926988..47927121,47927561..47927824,47927912..47928090,47928213..47928317)
AA seq 2548 aa
MPEAESGCSLQNANPCVDPTEHLPLAFLRSEFIPTAPTRSTSTIDWLPDFAGYSWVAYGA
SSLLVISHFPSPLSQEEALIGPIFRQVFALSDNSLPVTSISWSPETPSIGELAAASENCI
FVFAHDSASSKGSFCWSQNAILVQGTKVEAIEWTGSGDGIVAGGMETVLWKKKNTLWEIA
WKFKENYPQNLVSATWSIEGPSATAASMSQLDLLGPKEAGKCVFICCSDGKSEYIKLELC
HPQPVSMVQWRPSTRRHSPGDTKRSQRHVLLTCCLDGTVRLWCEMDSGKTRKVAKDTNDH
KTIRRSFCVGAIIEINQALNGALGMDIVITWAKEIRCMFETGEGANHFISTGVYEHGGTG
KCEWLVGYGPGSLVTLWAIHCLDDISPLRFPRVTLWKKQNLELEHPHNSGFSGFQGQSLL
NKVVISRDCVSGLPTICSLVHLSHCNSLVWSLLHAQRSGDVEDVSSDKSSTGQILSCSAS
RILSIEGHTGKILQVAVHPCVSEFELAVSLDSNGLLLFWSLSTISNCISDLPTLMPSWKL
CGKLRTRKSCSNYTSLRWAPSLLDEDMVLLMGHVGGIDCFIVKISQTEVDDIVCHYVCTI
PFTGHGHYEDGPANIFSVPLPSCNDKTVMYNKFMLLGVWLKGLESLSWEITFHSFDLSES
CCGCIDDNNTVKCSMCKFETTFCGKKYFIGVNPCSSQFPEPHTRNWVTSFAVVCPNNLVP
MQQKLVYDNDPCSKIPPYTMATGYSDGSLRLWRSELGGSSTSCMPWELVGMLVAHQGPVS
AISLTDGGRKIATVSAASHSNAVSNVRIWESVCVTELGSFVLEDTLSFDTNIVAVNWLTL
ENGQSLLGVCLQNELKVYAQRHYGGQILLDTKNSLKMQNWFCLAFSPTFAAHDFTWGRRA
IAIVVHQSYLSIYSQFLFLIDKKHQAKCNSNVFIDNFCCHKSGINENIVSTIFTVCDSES
SAGDQRGDYESAPSVNIDMKNDHLVASDQLKCGGAILGSWSMLEIAEKLRGSLPVYHPKA
LFLNIYSGNWKRAYVSVRHLVENLPSNYPSEKRYCYTKSSHIVPQILLSTYFEGLLSKGS
TDNGFQWSGLNTFSTSLQFRQFAYNMDLDASNSSSSTKSELSGFVELLQNVYELAGVTDA
EKMEILAVVDLLNEFDNKHSASVYENLDEPGQRFWVELRFQLLCFFRRFGKLVSAEELAV
DSRLIAWAFHSECQETLFGSILPNEPTWPEMRALGVGFWYTDVTQLRTRMEKLARLQYLK
KKDPKDCALLYIALNRIQVLAGLFKISKDEKDKPLVGFLSRNFQEEKNKAAALKNAYVLL
GRHQLELAIAFFLLGGDAASAVTVCARNLGDVQLALVICRLVEKHGGPLERNLVTKFILP
SSIERGDYWLTSLLEWELGNYSQSFLTMLGFQSTAVINNFALSSNSVAFMDPSIGLYCLM
LANKNSMRNAIGEKNAAILGRWAALMRATALNRCGLPLEALDCLSSSPSTIGGTDQESVL
NIGHSHILPEILKPSAATGSSNWLLRDVALHLESCAKLDLSLQYFSKLIRDHPSWPDLGF
GRASKCFMDFEIHQYEKLVQNFQQKLYTALAFFEQRFSMDSSSLIAKILSLLCNNGLLFI
GYDLLHGYICQGKSQEKSSDTVDGLSLYFCQHKPLLKAAEDISIFLSRFIAATSITCSHL
KSTNSENVRHHEVRSRWSNAQGYYFQSIIFSLWSLRAAMRTFSGSFPEELITPLFLLDLY
EYYVHFASAWLQRDSKGLLQVLQPVLITYTNGHTPYEVDMNNLKTFFHQSAELLTRNTSI
DNMVGDLQVSKFVDDERSTDLMNSIPEDERWQIMGACLWQHMSRFMKHKLNSMSVKLDEN
HSSRLLGGHISSWTSSLTNPESASIGLKEQMRLLTLFLAQLLKSALLHISSHHVKQLAFF
LRYKVENGFDIPTRRWLQEATPSQSGTLYQHLNQIVVSMNIINNKDEAAISELLWDVCSD
PSIIHEGFTQEKLNWRSYINCKLSKGWSHINEGVKLKHEIKKTCKNEDKLGSTLASGEVG
SASKDLFRNSRTSPRSWHKDANMANEVIPFQAPKEICKRNGELFEALCVNSIDQRQGAIA
SNRKGIVFFNLEDEIPLHDQLKYIWADADWPQNGWAGSESTPVPTFVSPGVGLGSNKGAH
LGLGGATIGVGSLARPGRDLTGGLAFGIPGYAGIGASALGWETQDDFEDYVDPPATVENI
STRAFSSHPLRPFFLVGSSNTHIYLWEFGKDKATATYGVLPAANVPPPYALASISALQFD
HYGHRFASAALDGTVCTWQLEVGGRSNVRPMESCLCFSSHAMDVSYITSSGSVIAAAGHS
SNGINVVVWDTLAPPTSSRASITCHEGGARSISVFDNDLGSGSVSPLIVTGGKGGDVGIH
DFRYIATGKTKKHKHSDRGGSSINTCAHADAQTGSGSKPGDQNGMLWYIPKAHLGSVTRI
STVPNTSLFLTGSKDGDVKLWDAKAAQLVYHWSKLHERHTFLQPSSRGFGGVVRAGVTDI
QVVSRGFLSCGGDGSVKLIQLEDYQHRL
NT seq 7647 nt   +upstreamnt  +downstreamnt
atgccagaagcagaatcaggctgtagtttacaaaacgcaaacccttgcgtggatccaaca
gaacaccttccacttgctttcctcagatccgaattcatcccgaccgccccgacccgatcc
acatccaccatcgactggctaccggatttcgccggttactcatgggtggcgtacggagca
tcatctctcctggtgatttctcatttcccttctcctctctctcaagaagaagccctaatt
ggtcccattttccgccaagttttcgcgctctctgacaattcgttgccggtaacctccatt
tcttggtctcccgagactccttcaatcggcgagctggctgctgcctcggagaattgtatc
ttcgtctttgctcatgactcagcgagctccaaaggttctttttgttggagccagaatgca
attcttgtacaaggtacgaaggtggaggcaattgagtggacaggatctggtgatgggatc
gttgctggtggaatggagactgttctgtggaaaaagaagaacacattgtgggaaatagct
tggaagtttaaagagaattatcctcagaatcttgtttctgcaacctggtcaattgaggga
ccttcagcaactgcagcttccatgagtcaactggaccttttaggacctaaggaggcggga
aaatgtgtgtttatttgttgtagtgatggaaagtctgaatacataaaactcgagctgtgt
catcctcagcctgtttcaatggtacaatggagaccatcaaccagaaggcattcaccggga
gacacaaaacgatcacagaggcatgtgctgcttacttgctgcttagacggaactgttaga
ttatggtgtgagatggacagtgggaagacaagaaaagttgccaaggacactaatgatcat
aaaaccataagacgatctttttgtgttggtgctataattgagataaatcaggcgttgaat
ggagcactgggcatggacatagttataacatgggcaaaagaaataagatgtatgtttgaa
acaggtgaaggagctaaccatttcatttctacaggggtgtatgaacatgggggaactgga
aaatgtgagtggttagttgggtatggtcctggaagtttggttaccttgtgggccatccat
tgtcttgacgacatttcccctttgaggtttccccgtgtcacattatggaagaaacaaaat
ttggaacttgaacaccctcataattctggtttttcaggttttcaggggcaatcacttctt
aataaagttgttatttcaagagattgtgtgtctggccttccaactatttgctctttggtt
catttgtcacattgtaattccttggtctggtctttactacatgctcaaagatcaggagat
gtagaggacgtatcttctgataaatccagcacaggacaaatcttgtcatgttctgccagt
aggattttaagcatagaaggtcatactggaaaaatcttacaagttgcagtacatccttgt
gtctctgaatttgaattggctgtttcactggattctaatggtttgctgttattctggtca
ctttccaccatttcaaactgcatctctgaccttccaacattaatgccctcatggaagctt
tgtggaaagctcagaactcgaaagtcatgttccaattatacaagcctgaggtgggcacct
tcacttctggatgaagacatggttcttctcatgggtcatgtcggaggaattgattgtttt
atagtaaaaatttctcaaactgaagtggatgatatagtgtgtcactatgtttgcactata
ccttttactggtcatggtcattatgaggatggtcccgctaatatcttctctgtacctttg
ccatcttgtaatgataaaactgttatgtataataaatttatgcttttgggggtatggttg
aaagggcttgagtctttatcatgggaaatcacctttcactcttttgatttatctgaaagc
tgctgcggatgtattgatgataacaatactgttaaatgcagcatgtgcaagtttgaaact
actttttgtggaaaaaaatatttcattggtgtcaatccttgttcatcacaatttcctgag
cctcacacccgcaattgggttacaagttttgcagtggtttgtccaaataatttggtgcct
atgcaacaaaagttggtttatgacaatgatccgtgcagtaaaattcctccatatactatg
gctacaggctactctgatggcagtttgagattgtggagaagtgaacttggtgggtcatca
acctcttgtatgccttgggagctcgtgggaatgttagttgctcatcaaggtcctgtttct
gctatctctttgactgatggtgggaggaagattgctactgtttctgctgcaagtcattca
aatgctgtcagcaatgttcgcatatgggagtctgtctgtgttacagaattagggagcttt
gtgttggaagatacattatcttttgatacaaatattgtagctgtaaattggttaacttta
gaaaatggtcagtctttacttggtgtttgcttgcagaatgagctgaaagtatatgctcag
aggcattatgggggtcaaattttgttggacactaaaaattctttgaagatgcaaaattgg
ttttgccttgcgttttctcctacttttgctgctcatgacttcacctggggtcgcagggcc
attgccattgttgttcatcagagctaccttagtatctatagtcagtttttgtttcttata
gataaaaaacatcaggccaaatgcaattcgaatgttttcatagacaatttttgttgccac
aagagtggaatcaatgaaaacattgtttctacgatattcacagtttgcgacagtgaatcc
tcagctggagatcaaaggggagattatgagtctgctccttctgtaaatattgatatgaaa
aatgatcaccttgtagcaagtgatcaactgaaatgtggtggagccattcttggttcctgg
agcatgctggaaatagctgagaagttaagaggatctttgcctgtttatcatccaaaggcg
ctgtttttgaatatatattcaggcaactggaagcgtgcatatgtgtctgtgaggcatctt
gttgaaaatcttccctctaattatccatctgagaagagatattgctatacaaagtctagc
catattgttccacaaatccttctgtcaacgtactttgaagggcttctctcaaaaggttca
actgataatggatttcaatggagtgggcttaatacattttcaacgtctttgcagtttcgc
caatttgcttacaatatggacttagatgcttccaattccagttcatcaacaaaatcggag
ttaagtggctttgttgagttacttcagaatgtctatgagctagcaggtgtaactgacgca
gaaaagatggaaattcttgcagttgtagatctattgaacgaatttgataataagcactct
gcttcagtctatgaaaatcttgatgaacctgggcaaaggttttgggtggaattaagattt
cagctactatgtttctttcgaaggtttggtaaattggtatctgcagaagagttggctgtt
gactccaggcttatagcatgggctttccattctgagtgtcaagaaactttgtttggttct
attttacctaatgaaccaacttggccagaaatgcgggctttgggtgttggattttggtat
accgatgtaacacaattgcgcacaaggatggagaaactggcaagattgcaatacctgaag
aagaaagatcccaaggattgtgcacttttatatatagcactgaatagaattcaagttttg
gctggccttttcaaaatcagcaaggatgagaaggacaaaccgcttgtgggatttctttct
cgcaattttcaggaggagaaaaataaggcagcggcactgaaaaatgcatatgtcttactg
gggagacatcaattagagctagctattgctttctttctgcttggaggtgatgctgcttct
gcagtcactgtgtgcgcaagaaaccttggggatgtacagctcgcactagtaatctgtcgg
cttgtggagaagcatggtggaccattggagcgtaatcttgtgacaaagtttatacttcca
tcttcaattgagaggggagactactggctcactagccttctggagtgggaattaggaaac
tattctcagtcttttctcaccatgctgggtttccaatcaactgctgtaatcaacaatttt
gctctttcttccaatagtgttgcttttatggatcccagtattggcttgtattgcctcatg
ctagcaaacaaaaatagcatgaggaatgcaataggggagaaaaatgctgcaatccttggt
cggtgggcagctttgatgagagctactgccttgaacagatgtggccttcctcttgaagct
ttggattgcctttcatcttctcccagcactattgggggtacagatcaggaaagtgtattg
aatattggacattctcatattctacctgagattctgaagccttctgctgctactggttct
tctaactggctattacgtgatgttgctttgcatctggagtcctgcgctaagttggattta
tctctccagtatttctcaaaattaattagggaccatcctagttggcctgatttaggattt
ggtagagcgagtaaatgctttatggattttgagattcatcaatatgagaaattagtgcaa
aattttcaacagaagttatatactgcacttgcattttttgagcagagattttcaatggat
tcttcctctctaattgcaaagattttaagcttgttatgcaacaatggattattgttcatt
ggatatgatttattacatggatatatttgtcaaggaaagtcacaagaaaagagtagtgat
acagttgatggcctctccttgtatttttgtcagcataagccccttttgaaggctgctgaa
gatatctccatttttctttcacggtttattgctgccactagcattacttgctcccatttg
aaatccactaatagtgaaaatgttaggcatcatgaagttagatctaggtggtcaaatgct
caggggtattattttcaatctatcatattctcgctgtggagtttaagagctgctatgagg
actttttctggctccttccctgaagagctcataactcctctttttcttcttgatttatat
gaatattatgtgcattttgcctctgcttggcttcagagagattcaaaaggtcttcttcag
gtgcttcaacctgtcttgatcacatataccaatggacatactccgtatgaagttgatatg
aataatctgaagacattttttcaccaaagtgcggagttgttaacccgcaatacatcaatt
gacaatatggttggggaccttcaggtttctaaatttgttgatgatgaaagaagtacagat
cttatgaattcaattccagaagatgaaagatggcaaatcatgggggcttgcttgtggcaa
cacatgtccaggtttatgaaacataagctcaattcgatgtccgttaaacttgatgagaat
cattcttctagacttttggggggccacatctcttcctggacttctagtttgacaaatcct
gaatctgctagtatcggcttaaaggaacaaatgaggttgctcactttgtttttggctcaa
ttactgaagtccgcattgttgcatatatcttctcatcatgtgaaacaacttgcatttttc
ctacggtataaggtagaaaatggatttgatatccctactaggagatggttacaagaagct
actccatctcaatctggaaccctctatcaacatttaaatcagattgttgtgagtatgaac
attataaataacaaagatgaagcagccatatctgaattattatgggatgtttgttctgat
cccagtataatacacgaaggtttcacgcaagaaaaattaaattggcgatcttatatcaat
tgtaaactgtctaaaggatggagtcacataaatgaaggtgtcaagttgaagcatgaaatc
aaaaagacctgtaaaaatgaagataagttaggcagtactttggccagtggtgaagttgga
tcagctagtaaagatcttttccggaatagtcgtacttctcctaggtcctggcacaaagat
gcaaacatggcaaatgaggttataccatttcaagcgcccaaggaaatatgcaagagaaat
ggggaactctttgaggcactgtgtgtcaactccattgaccaaaggcaaggtgcaatcgct
agcaaccgaaagggaattgttttctttaacctggaagatgagatacctctccacgatcaa
ttaaagtatatctgggcagatgctgattggccacagaatggttgggctggttcagaatca
actccagttccaacttttgtttctcctggtgttggtcttgggagcaataaaggggcacac
cttggattgggtggtgcaaccattggtgtcggatctttagcaagaccagggagagacttg
actggtgggttagcatttgggattcctggttatgctggtattggagcatctgccttaggt
tgggaaactcaagatgattttgaggattatgtggatccaccagctacagtagaaaatata
agtacaagggctttctcaagtcaccctttaaggccttttttcttggttggttctagcaat
acacacatttacttgtgggagtttggtaaggataaagctactgcaacttatggtgtgctg
cctgctgcaaatgttcctcccccatatgctcttgcatctatatctgcattgcaatttgac
cactatggacaccgatttgctagtgcggcactagatggaactgtatgcacatggcagctg
gaggtgggaggaaggagcaatgtccgtccaatggaatcttgtctctgctttagtagccac
gcaatggatgtcagttatattacttcaagtgggtcagtcattgctgcagccgggcacagc
tctaatgggatcaatgtagttgtatgggacacattggctccaccaacaagttcccgagct
tccatcacctgtcatgaaggtggtgcacgctccatttctgtgtttgataatgacctcgga
agtggatctgtttctccccttattgtcactggtggtaaaggtggcgatgttggaatacat
gatttccggtacatagcaactgggaaaactaagaagcacaagcactcagataggggtgga
tcaagtatcaatacgtgtgcgcacgctgatgcgcaaacagggtctgggagtaaaccagga
gatcagaatgggatgctttggtatataccaaaggcacacttagggagtgtcaccagaata
tccaccgtcccgaataccagtttgttcctaacagggagcaaagatggagatgtaaaactt
tgggatgcaaaagcagcgcagttagtttatcactggtcaaaattgcatgaaaggcacacc
tttttgcaaccgagctctcggggttttggcggagttgtacgggctggtgtaacagatata
caagttgtttcacgcggtttcttatcatgtggtggagacggctctgtgaagctgattcaa
ctcgaggattatcagcataggttgtga

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