Citrus sinensis (Valencia orange): 127902936
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Entry
127902936 CDS
T02983
Name
(RefSeq) probable pectate lyase 19
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
127902936
Enzymes [BR:
cit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
127902936
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
127902936
NCBI-ProteinID:
XP_052298901
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All DBs
Position
6:join(25115764..25115951,25116159..25116810,25116925..25117167,25117331..25117555)
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AA seq
435 aa
AA seq
DB search
MELARLKLIFLFSFIILIPCLSAIAEADEVWRRRAEEAMQTTEQYYDPDPVAVASNLNMK
VQDLSKQTAARRGLLNAESGQCEATNPIDKCWRCKENWAEDRQALAGCALGFGSKATGGK
GGKIYEVTDSSDNNMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELVVQGNKTIDGR
GANVHIANGAGIRLQFVQNVIIHGIHIHNISPASGGMIRDSVDHVGNRGPSDGDAVSVFG
SSNIWLDHLTLSKAQDGLIDAIQGSTAITISNCHLSNHDKAILLGATDTFTEDKKMQVTV
AFNRFDKGLVQRMPCIRFGFAHVVNNDYNQWEMYAIGGLKGPTILSQGNRFFASDNKNAK
EVTKRMDCSPEEGNGWIWRSEGDVFLNGAYFNASGDPKKQIKYELNDVIKPAPGTEVQRI
TKFAGALVCKPGQQC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggagctagctaggctaaaattaatctttcttttctcttttatcattttgatcccttgc
ctatcggctatcgccgaggccgacgaggtatggaggcgacgagctgaagaagccatgcag
accactgagcagtactatgatcctgaccctgtagctgttgccagcaacttgaacatgaaa
gttcaggacttgtcaaagcagactgctgccagaaggggcttgttgaatgcagaatcaggg
caatgtgaggcaacaaacccaattgacaaatgttggcgttgcaaagagaactgggcagaa
gatcggcaggcgctagcaggttgcgcgcttggtttcggcagtaaagctaccggaggaaaa
ggtggaaaaatttatgaggtgactgattcttctgacaataatatggagaaccctaaggtt
ggtactttacgccatgcagtgatccaaaaagaacctttatggatcatctttgccaaggac
atgaacatcaagttgcaacaagaattggttgtccagggtaacaagaccattgatgggcgt
ggagccaatgtacacattgccaatggagctggaattaggctacagtttgtgcaaaatgtc
atcattcatgggattcatattcataacatttctcctgccagtggtggtatgattagggat
tctgtggatcatgtgggaaatagaggtccaagtgatggggacgctgtttcagtatttggt
tcgtcaaatatttggcttgatcatcttacattatctaaagcccaagatgggctcattgat
gccattcaaggatctacagccatcaccatttcaaactgccacctctcaaaccatgacaag
gcaattttgctaggtgcaaccgatacgttcacggaagataaaaagatgcaagtgactgta
gcattcaaccgctttgataagggattggtgcaaagaatgccatgcatcagatttggtttc
gctcatgttgtgaacaatgattacaatcaatgggaaatgtatgcaattggtggtctcaaa
ggccccaccattcttagccagggtaataggttctttgcctcagataacaagaatgccaaa
gaggtgacaaagagaatggactgcagccctgaagaagggaatggttggatatggagatca
gagggagatgtattcttgaatggggcttacttcaatgcatccggtgacccgaaaaagcaa
atcaaatacgaactgaatgatgtgattaaaccagcgccaggaacagaagttcagaggatc
acaaaatttgctggggcacttgtctgcaagccaggccagcaatgttaa
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