Citrobacter sp. LUTT5: GUC46_02255
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Entry
GUC46_02255 CDS
T10487
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
citr Citrobacter sp. LUTT5
Brite
Messenger RNA biogenesis [BR:
citr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GUC46_02255 (csrD)
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NCBI-ProteinID:
QHI81177
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Position
455310..457250
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AA seq
646 aa
AA seq
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MRLTTKFSAFVTLLTGLTIFVTLIGCSLSFYNAIQYKFTTRVQAVATAIDTHLVSRDVVA
LTPQIDELMVSVDIVRIELLQGEHVVYDHSRTSSYRPAGTNNLYREITVPLVKHPGMSLR
LVYQDPMGNYFHSLLTTAPLTIAIAFIILMLFLSVRWLQRQLSGQELLEIRSTRILNGER
GPNVRGTVYEWPARTSSALDMLLTEIQNAREQRSRLDTLIRSYVAQDTKTGLSNRLFFDN
QLATLLEDQEKVGSHGVVMMVRLPDFTLLRDSWGITLAEEQISTLINLLSTFMTRYPGAL
LARYHRSDFAILLPHRTLKEAESIAGQLLKAVDALPTNKMIDRADMVHIGICVCRSGQSP
EQVMDHAEAATRNSVLQGGNSWSVYDDSLPEKGRGNVRWRTLIEQMLSRGGPRIYQKPAV
TREGRVHHRELMCRIFDGNEEVISAEYMPMVLQFGLAEEYDRLQISRLTLLLGYWPQENL
AMQITVESLIRPRFQRWLRDTLMQCEKSLRKRIIIELAEADVCQHISRLQPVIRLMNALG
VRIAVTQAGLTLVSTSWIKELNVELLKLHPSLVRNIDKRTENQLLVQSLVEACSGTPTQV
YATGVRSRSEWHTLTERGVAGGQGDFFAASQPLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaaattttcagcttttgtcacgctgcttactgggttaacgatcttc
gtgactctgatcggctgttcgctgagtttctataacgctattcaatataagttcaccacg
cgcgtgcaggcggtcgcgacggcgattgatacgcatctggtctccagagatgtcgttgcg
ttaaccccgcaaatcgatgagctgatggtttctgttgatatcgtgcgcatcgaactgttg
cagggcgaacacgtggtgtatgaccactcgcgcaccagtagctaccgaccggcagggacg
aacaatctctaccgcgagatcaccgtaccgttggtcaagcatccgggcatgtcattgcgt
ctggtttatcaggatccgatgggtaactatttccattcgctactgaccaccgcaccgctc
acgatagccattgctttcattattctgatgctctttttgtctgtgcgctggcttcagcgc
cagctttcgggtcaggagctgctggagattcgttccacacgtattctgaacggcgaacgt
gggccgaacgtgcggggaacggtctatgaatggcctgcgcgcaccagcagtgcgctcgat
atgctgctgactgaaattcaaaatgctcgcgagcaacgcagccgcctggatacgctgatt
cgttcctatgtcgcgcaggacacaaaaactgggctaagcaaccgcctgttctttgataac
caactggccacgctgctggaagatcaggaaaaagtaggctcgcatggcgtcgtgatgatg
gtacgcctgccggactttacgctgctgcgcgatagctggggaatcaccctcgcggaagaa
caaatctcgacgctgatcaatttgttgtcgacttttatgacgcgctatccgggcgcgttg
cttgcgcgttaccaccgtagcgattttgccatcctgctgccacaccgcacgttgaaagag
gcggaaagtattgccgggcaattattaaaagcggtagatgcacttccgactaataaaatg
atcgatcgtgccgatatggttcatattggcatttgcgtttgccgcagcggtcagtcgccg
gagcaagtgatggatcatgctgaagccgccacgcggaattcggtattgcagggcggaaat
agctggtcggtctatgatgactcgctgccggaaaaaggtcggggcaacgtacgctggcga
acgctgatcgaacagatgctcagccggggcgggccgagaatttatcaaaagcctgcagta
acccgtgaagggcgggtgcaccatcgggagctgatgtgccgtatttttgatggtaacgaa
gaggtcatttcggcggaatatatgccgatggtccttcaatttggcctggctgaagagtat
gaccgtttgcagataagccgtctgaccctgcttttgggttactggccgcaggaaaatctg
gcgatgcagataacggttgaatcgcttattcgcccacgttttcagcgctggctgcgtgat
acgctgatgcagtgcgaaaaatcattacgcaaacgcataattattgaacttgctgaggca
gatgtctgtcaacatatcagccggttacagcccgtcatcagattgatgaatgcgctgggc
gtgcgtattgccgttacgcaggcggggttaacgctggtgagcaccagttggattaaagag
cttaacgttgagttattgaagctgcatccaagtctggtgaggaacattgataagcgaacg
gaaaatcagcttctggttcaaagcctggtggaggcctgttcgggaacacccacgcaggtt
tacgctacgggcgtacgttcgcgtagtgagtggcatacgctgacagaacgcggagttgcg
ggtgggcaaggggatttttttgctgcatcacaaccacttgacactaacgtgaaaaaatat
tcgcaaagatactcggtttaa
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