Citrobacter sp. LUTT5: GUC46_02675
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Entry
GUC46_02675 CDS
T10487
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
citr Citrobacter sp. LUTT5
Pathway
citr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
citr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GUC46_02675 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
citr03019
]
GUC46_02675 (pnp)
03016 Transfer RNA biogenesis [BR:
citr03016
]
GUC46_02675 (pnp)
Enzymes [BR:
citr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GUC46_02675 (pnp)
Messenger RNA biogenesis [BR:
citr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GUC46_02675 (pnp)
Transfer RNA biogenesis [BR:
citr03016
]
Prokaryotic type
tRNA degradation factors
GUC46_02675 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
KH_2
aRib
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
DUF4172
Motif
Other DBs
NCBI-ProteinID:
QHI81257
LinkDB
All DBs
Position
543270..545402
Genome browser
AA seq
710 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALTLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQAINELAKEAGKPRWDWQPEAVNE
ALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLVAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTTR
DAQNLDELMGERTDNFLFHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPELDK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAGEPEAPASQGE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggtcagcataccgttacgctggaaacc
ggcatgatggcgcgtcaggcgactgccgctgttatggttagcatggatgacaccgcggta
ttcgttaccgttgttggccagaaaaaagcgaaaccaggccaggactttttcccgctgacc
gttaactatcaggagcgtacctacgctgctggccgtatcccgggtagcttcttccgtcgt
gaaggccgtccgagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccagttcgc
ccgctgttcccggaaggcttcgttaacgaagttcaggttatcgcgaccgttgtttccgtt
aacccgcaggttaacccggacatcgtggcaatgattggtgcatctgctgcgctgactctg
tctggtattccattcaacggcccgatcggtgctgcacgtgttggttacatcaatgaccag
tacgtactgaacccgactcaggacgaactgaaagaaagcaagctggacctggttgttgcg
ggtactgaagcagccgtactgatggttgaatccgaagcagaactgctgagcgaagatcag
atgctgggtgctgttgtgttcggtcacgaacagcagcaggttgtgattcaggctatcaac
gagctggcgaaagaagctggcaaaccgcgttgggactggcagccagaagccgtcaacgaa
gcgctgaacgcacgcgttgccgcactggcagaagctcgcctgagcgatgcttaccgcatc
actgacaaacaagagcgttatgctcaggttgacgtaatcaaatctgaaaccatcgcgact
ctggtggctgaagacgaaaccctggacgctaacgaactgggtgaaattctgcacgctatc
gagaaaaacgttgttcgtagccgcgtactggcaggcgagccgcgcatcgatggccgtgaa
aaagacatgatccgtggtctggacgtgcgtactggcgttctgccgcgtacccacggctcc
gcactgttcacccgtggcgaaactcaggcgctggttactgcgaccctgggcaccactcgt
gatgcgcagaaccttgacgaactgatgggcgagcgcactgacaacttcctgttccactac
aacttccctccgtactgcgtaggtgaaaccggtatggtcggttctccgaagcgtcgtgag
attggtcacggccgtctggcgaaacgtggcgtactggcagtaatgccggaactggataaa
ttcccgtacaccgtgcgtgtggtttctgaaatcaccgaatctaacggttcttcttccatg
gcttccgtatgtggtgcttccttggcgctgatggacgcaggcgtgccgatcaaagccgcc
gttgcgggtatcgcgatgggtctggtgaaagaaggcgacaactttgttgttctgtctgac
atcctgggcgacgaagaccacctgggcgatatggacttcaaagtggcgggttcccgcgac
ggtatctctgcactgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgctctgaaccaggctaaaggtgcgcgtctgcatatcctgggtgtgatggaacaagcg
attaacgcaccgcgtggcgatatctctgaatttgctccgcgtatccacaccatcaagatc
agcccggacaagatcaaagacgttatcggtaaaggcggttctgttatccgtgctctgacc
gaagaaaccggcaccaccattgaaatcgaagatgatggtaccgtgaagattgctgcgacc
gacggcgaaaaagcgaaatatgctatccgtcgtatcgaagagatcaccgcagagatcgaa
gtaggccgtatctacaatggtaaagtgacccgtatcgttgactttggcgcattcgttgcc
atcggtggcggtaaagaaggtctggtacacatctctcagatcgctgataagcgcgttgag
aaagtgaccgactacctgcagatgggccaggaagtaccggtcaaagttctggaagttgat
cgccagggccgtgtacgtctgagcattaaagaagcaactgagcagtctcagcctgcaggc
gaaccggaagctccggcaagccagggcgagtaa
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