Citrobacter sp. LUTT5: GUC46_02690
Help
Entry
GUC46_02690 CDS
T10487
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
citr Citrobacter sp. LUTT5
Pathway
citr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
citr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GUC46_02690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
citr03019
]
GUC46_02690
03009 Ribosome biogenesis [BR:
citr03009
]
GUC46_02690
Enzymes [BR:
citr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GUC46_02690
Messenger RNA biogenesis [BR:
citr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GUC46_02690
Ribosome biogenesis [BR:
citr03009
]
Prokaryotic type
rRNA helicases
GUC46_02690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
AAA_22
DRTGG
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QHI81259
LinkDB
All DBs
Position
546576..548504
Genome browser
AA seq
642 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF
SLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQSLREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKMQPEEELDIET
LAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRGPRDRNDRGPRDRNDRGGEDRPRRE
RRDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMPG
DVLQHFTRTRILNKPMNMQLVGDAVPHTGGERRGGGRFSGERREGGRGEGRGFSGERREG
GRGDGRRFSGERREGNRGPRRDDSSAPRRDDSAGRRRFGGDA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccaatccaggcagagtgcattccgcatctg
ctgggcggccgcgatgttctgggtatggcccagacaggtagcggcaaaactgcagcgttc
tctttaccgctgctcaacaatcttgatcctgagctgaaggcacctcagattctggtgctg
gcaccgacccgcgaactggcggttcaggtagcagaagccatgacggatttctctaaacac
atgcgcggcgtgaacgtggttgccctgtacggcggccagcgttatgacgtgcaattacgt
gccctgcgtcagggaccacagatcgtcgtcggtacgccgggccgtctgctggatcacctg
aagcgcggtactctggacctctccaaactgagcggtctggtactggacgaagctgacgaa
atgctgcgtatgggcttcatcgaagacgttgaaaccatcatggcgcagatcccggaaggt
catcagaccgctctgttctctgcaaccatgccggaagcgattcgtcgtattacccgtcgc
tttatgaaagagccgcaggaagtacgcattcagtccagcgttaccacgcgtcctgacatc
agccagagctactggactgtgtggggcatgcgtaaaaatgaagcgctggtgcgtttcctg
gaagcagaagattttgatgcggcgattatcttcgttcgtaccaaaaatgcgaccctggaa
gtggcagaagcgctggagcgtagcggttatagcagcgctgcactgaacggcgacatgaac
cagtccctgcgtgagcagactctggaacgtctgaaagatggccgcctggatatcctgatt
gctaccgacgttgcggcccgtggcctggacgttgagcgtatcagcctggttgttaactac
gacatcccgatggattccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctggccgtgcgctgctgttcgttgagaaccgtgagcgtcgtctgctgcgtaacatc
gaacgcaccatgaagctgacgattccggaagtagaactgccgaacgcagaactgctgggc
aaacgccgtctggaaaaattcgccgctaaagtacagcagcagttggaaagcagcgatctg
gatcagtaccgtgctctgctggcgaaaatgcagccggaagaagagctggatatcgaaacg
ctggcagccgcactgctgaaaatggctcagggcgaacgtccgctgatcctgccgccagat
gcaccaatgcgtccgaaacgcgaattccgcgatcgtgatgaccgtggtccgcgcgatcgt
aacgatcgtggccctcgtgaccgtaatgaccgtggtggtgaagatcgtccgcgtcgtgaa
cgtcgtgacgttggtgacatgcagctgtaccgcattgaagtgggccgtgatgacggtgtt
gaagttcgtcatatcgttggcgcgattgctaacgaaggcgatatcagcagccgttacatc
ggtaacatcaagctgtttgcttcccactccaccatcgagctgccgaaaggtatgccgggc
gacgtgctgcagcactttacccgtactcgcatcctgaacaagccgatgaacatgcagctg
gttggcgatgcagttccgcacaccggtggtgagcgtcgtggtggtggccgtttcagcggc
gagcgtcgtgaaggtggtcgcggtgaaggtcgtggctttagcggtgaacgtcgtgaaggc
ggtcgtggcgatggtcgtcgttttagcggcgaacgtcgtgaaggcaaccgtggtccgcgt
cgtgacgattcttctgctccgcgtcgtgatgactccgctggtcgtcgtcgtttcggcggt
gacgcataa
DBGET
integrated database retrieval system
