Citrobacter sp. LUTT5: GUC46_04565
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Entry
GUC46_04565 CDS
T10487
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
citr Citrobacter sp. LUTT5
Pathway
citr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
citr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GUC46_04565 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
citr03400
]
GUC46_04565 (recD)
Enzymes [BR:
citr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GUC46_04565 (recD)
DNA repair and recombination proteins [BR:
citr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GUC46_04565 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
Helicase_RecD
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_22
UvrD-helicase
SLFN-g3_helicase
nSTAND3
MukB
AAA_28
AAA_16
UvrD_C
CbiA
FtsK_SpoIIIE
DUF6079
DO-GTPase1
T2SSE
DEAD
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QHI81607
LinkDB
All DBs
Position
965073..966902
Genome browser
AA seq
609 aa
AA seq
DB search
MTIQKRLLEAVEQKQLRPLDAQFALAVAGNDNPAVALAAALLSREAGEGHVCLPLSRLSR
SEDAHPLLSAWLAEAGEPEDWAECLLASGAVSRGEQPTPLVLYGDRLYLNRMWHNERAVA
RFFGEVNYAIEVDEQRLTHTLAALFPPVEGVNWQKVAAAVALTRRISVISGGPGTGKTTT
VARLLAALIQMADGERCRIRLAAPTGKAAARLTASLGAALRELPLTDEQKKRIPDDASTL
HRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPPHGRVIFLGDRDQ
LASVEAGAVLGDICAFVGDGFTPERARQLSRLTETTIPAGSGTQAAALRDSLCLLQKSYR
FGSDSGIGQLAAAINRGDKAAIKTVFQQGFGDIEKRALHSSEDYAAMLEEALAGYGHYLD
LLRERAEPDAVIQAFNEYQLLCALREGPFGVGGLNERIEQVMAQKRKIHRSTHSRWYEGR
PVMIARNDSSLGLFNGDIGIALDRGQGLRVWFALPGGSIKSVQPSRLPEHETTWAMTVHK
SQGSEFDHAALILPNQHSPVVTRELVYTAVTRARRRLSLYADERILSGAIATRTERRSGL
SALFNDGMM
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgacaatccagaaacgattactggaagccgttgagcaaaagcagctccgccctctggat
gcccagttcgcgctggcggttgccggaaatgataaccctgccgttgcgctggcagcggcg
ttgctcagccgtgaagcaggagaagggcacgtctgcttaccgctttcgcgtctatcccga
agtgaggacgcccatcctctgttaagcgcctggctcgctgaagcgggagagcccgaagac
tgggcggaatgcctgctggcctccggggcggtaagccgtggcgagcagcccacaccgctg
gtgctgtacggcgatcgtttgtatctgaaccggatgtggcataacgaacgcgcggtggcg
cgctttttcggcgaagttaactacgccattgaggtggatgaacaacggctgacccacacg
ctggcagcgctgtttccgcccgttgaaggcgttaactggcaaaaagtggccgctgctgtc
gcgcttacccgtcgtatatcggtgatctccggcggaccggggaccggaaaaacaacaacg
gtggcgaggcttctggcggcgttgattcagatggcggacggtgaacgctgtcgtattcgt
ctggcggcgcccacgggaaaagcagcagcacgtctgaccgcctcgctgggcgcggcgttg
cgtgaactgccgctgaccgatgagcaaaagaagcgcattcccgatgatgccagtacgctg
catcgattattaggcgctcagcctggtagccaacgcttgcggcatcatgcaggaaacccg
ctgcatcttgacgtgctggtagtggatgaagcctcgatgatcgatttgccgatgatgtcg
cgccttatcgatgcgctaccgccacacgggcgggtgatttttctgggcgatcgcgaccag
ctcgcttctgttgaagcgggggcggtactgggggatatctgtgctttcgtcggtgatggt
tttaccccggagcgtgcccgccagcttagtcgcctgactgaaaccactattccagctggt
tcgggaactcaggcggctgctctgcgcgacagtttgtgcctgctgcaaaagagctaccgt
ttcggtagcgattccggaatcggtcagttggctgcggcgattaatcgtggtgacaaagcc
gcgataaaaacggtcttccagcagggatttggcgacatcgaaaaacgcgctctgcacagc
agcgaagattacgctgcgatgctggaggaagcgctggcgggttatggtcactatctggat
ttactgcgcgagcgcgccgagccggatgctgtcattcaggccttcaatgagtatcagcta
ttgtgtgccctgcgggaaggtccgtttggcgtgggtggtttgaatgaacgcattgagcag
gtgatggcgcaaaaacgcaaaattcaccgttcgacgcatagccgctggtatgagggaagg
ccagtgatgatcgcgcgcaatgacagttcgctgggattatttaacggtgatattggcatt
gccctggatcgtgggcagggtctgagggtgtggtttgcgctgccgggcggttctatcaaa
tcggtccagcccagccgcttgcctgaacatgaaaccacctgggcaatgacggtgcacaaa
tcgcagggatctgagtttgaccacgcggcgttgattttacccaaccagcattcacctgtg
gtgactcgcgagctggtctataccgccgttacccgcgcacgccgtcgtttgtcgctgtat
gccgatgagcggatattgagtggcgccattgccacccgcactgaacgccgcagcggattg
tcggcgttgtttaatgatggcatgatgtag
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