Citrobacter sp. LUTT5: GUC46_04880
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Entry
GUC46_04880 CDS
T10487
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
citr Citrobacter sp. LUTT5
Brite
KEGG Orthology (KO) [BR:
citr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
citr03016
]
GUC46_04880 (truD)
Enzymes [BR:
citr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
GUC46_04880 (truD)
Transfer RNA biogenesis [BR:
citr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GUC46_04880 (truD)
Prokaryotic type
GUC46_04880 (truD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QHI81667
LinkDB
All DBs
Position
1034109..1035158
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AA seq
349 aa
AA seq
DB search
MTAFEDLTYLHGKPQGHGVLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGNAMPDLSKFELEGCKVLEYARHKRK
LRLGALKGNEFTLVLREVSERNDVEARLQAINERGVPNYFGAQRFGIGGSNLQGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQIVSERLKKTDFNQVVDGDALQLSGRGSWFVATQEE
QTELQRRVDEKELMITAALPGSGEWGTQRDALAFEEAAVADETALQFLLLREKVDASRRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAYIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgtttgaagatctgacgtatctccatggcaaaccacaaggccatggcgttctg
aaagcgaatccggaagactttgtcgtcgtcgaagatttaggcttcgaacccgatggcgaa
ggcgagcacattttggtgcgtatcctgaaaaacggttgtaacacccgttttgtggctgac
gcgctggcgaaattcctgaaaattcatgcccgcgaagtgagctttgctggccagaaagac
aagcatgcggtcacggaacagtggctgtgtgcgcgtgtgccgggcaatgcgatgcctgat
ttaagcaaatttgagcttgaaggctgtaaagtgctggagtacgcgcgccacaagcgtaag
ctgcgtttaggggcgctgaaaggcaacgaatttacgctggtgttgcgtgaagtgagcgag
cgaaatgatgttgaagcgcgtttgcaggcaattaacgagcgcggcgtaccgaactatttt
ggcgctcagcgttttggtatcggcggcagcaacctgcaaggggcgctgcgctgggcgcaa
agcgatgcgccggtgcgcgatcgcaataaacgcagtttttggttgtcggcggcccgtagc
gcgttgtttaatcagatagtcagtgaacgcctgaaaaaaacagactttaatcaagttgtt
gacggcgatgcgctacaattatcggggcgcggaagctggtttgtcgccacacaggaagaa
caaactgaattacagcgtcgcgtcgatgagaaagagttgatgattacagcggcattgccg
ggcagcggtgagtggggaactcaacgcgacgcgctggcgtttgaagaagccgctgttgct
gatgaaaccgcgctgcagtttctgttattgcgcgagaaagtcgacgcatcgcgtcgcgct
atgttgctgtatccacaacaattaagctggaactggtgggatgacgtaaccgttgagtta
cgtttctggctaccggcaggtagcttcgccaccagtgttgtaagggaacttattaacaca
atgggtgattatgcgtatattgctgagtaa
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