Citrobacter sp. LUTT5: GUC46_15870
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Entry
GUC46_15870 CDS
T10487
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
citr Citrobacter sp. LUTT5
Pathway
citr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
citr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GUC46_15870 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
citr03019
]
GUC46_15870 (rhlE)
Enzymes [BR:
citr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GUC46_15870 (rhlE)
Messenger RNA biogenesis [BR:
citr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GUC46_15870 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QHI83705
LinkDB
All DBs
Position
complement(3277877..3279223)
Genome browser
AA seq
448 aa
AA seq
DB search
MSFDSLGLNPEILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QHLITNQPHGKSRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDVLIATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKSLAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
EKLLKKEIPRIATPGYEPDPSIKAEPIQNGRQQRGGGGGRGQGGAGRGQQPRRQDGGAPK
AKPRNGEGKPAGDKPRPPRRPRKPSSAQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggtttaaaccctgaaattttacgtgccgttgccgagcagggt
taccgtgaacctacccctattcagcagcaggctattcctgccgtgctggaaggccgcgat
ctgatggccagcgcccagaccggtacggggaaaacggcaggttttaccctgccgctgttg
cagcacctgatcaccaatcagccgcatggtaaaagccgtcgtccggttcgtgcgctgatc
ctcacgccaacccgtgaactggcggcccagattggcgaaaacgtacgtgattacagtaag
tatctgaatattcgctcgctggtggtcttcggcggcgtcagcattaacccgcagatgatg
aaactgcgtggcggtgtggatgtactgattgccaccccgggtcgtttgctcgatctggag
catcagaatgcggtaaaactggatcaggtggagatcctggtactggatgaagctgaccgc
atgctggatatgggctttattcacgatattcgtcgcgttctggcaaaactgccggcaaaa
cgtcagaacctgctgttctcggcaacgttctctgatgacattaagtcgctggccgaaaaa
ctgctgcataacccgctggaaatcgaagtggcgcgtcgtaataccgcgtccgagcaggta
actcagcatgttcatttcgtcgataaaaaacgtaaacgtgaactgttgtcacagatgatt
ggtcagggcaactggcagcaggtgctggtgtttacccgtaccaaacatggcgcgaaccat
ctggcagaacagctgaataaagacggcatccgcagtgcggcaatccacggtaataaatct
cagggggcacgtacacgtgcgctggctgattttaaatccggtgatatacgcgtgctggta
gcgaccgatattgccgcgcgtggtctggacattgaagagttaccgcacgtggtgaactac
gagctgccaaacgtcccagaagattatgtgcaccgtattggtcgtaccgggcgtgccgct
gctaccggcgaagcgttgtctctggtgtgcgtcgatgaacacaagttgttgcgtgacatc
gagaagctgctgaaaaaagagatcccgcgtattgcaacgccaggctatgagccagatccc
tccattaaagctgagccgatccagaatggtcgccagcagcgtggcggcggtggtggtcgc
gggcagggcggagcagggcgtggccagcagccgcgtcgtcaggatggcggtgcgccaaaa
gcgaagccgcgtaatggcgaaggcaaaccggcaggcgataagcctcgtccgccgcgccgt
ccgcgcaaaccgtcctcagcacagtaa
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