Citrobacter sp. LUTT5: GUC46_17910
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Entry
GUC46_17910 CDS
T10487
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
citr Citrobacter sp. LUTT5
Brite
KEGG Orthology (KO) [BR:
citr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
citr03400
]
GUC46_17910 (sbcC)
DNA repair and recombination proteins [BR:
citr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GUC46_17910 (sbcC)
Archaeal homologous recombinant proteins
GUC46_17910 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_15
cobW
nSTAND3
preATP-grasp_3
AAA_21
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHI84084
LinkDB
All DBs
Position
3710619..3713762
Genome browser
AA seq
1047 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVRGEAYRAFWSQNRARNQPEGNLQVPRVELARCA
DGKILADKVKDKLEMTAELTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEKHKSARTELEKLQAQASGVALLAPEQVHSLTESLQVLTDEEKQYLTSQQ
TQQQHLNWLIRQNELQTDINHHQQALQAALQAQEDAQPQLAALSLALPARALRPHWERIQ
EQTATIERTRQKIQEVNARLQSSLTLRGRIRQQAQMQSTLMLAEQQTLTDWLNEHDRFRL
WSSELAGWKALLAQQSDASTQLRQWQQLRENDTRKLNALTLPALTLSPQEVTDALAQHVQ
LRPLRQRLSNLHGQITPKQKQLAQLRATLVQRQQELTQRNAVLAEKRQRYKDKNQQLTDV
RVICEQEARIKDLESQRALLQSGMPCPLCGSTAHPAIERYQTLELSVNQTRREALEKEVK
TLADEGSTLRGQLEAITQQLQRDEREAETLSQEEQALTQEWLTVTASLNVTLQPQDDIAP
WLAAQEEHEQQLHQLSLRHTLQAQITAHTEQITQLQLHIDQRQATLTAELSRYGLALPPE
DDVASWLSERANEAQMWQQRQNELTELQARIAQLAPLLETLPETEALSENIEDLSLENWR
QVHDDCLSLQGQWQTLQQQEAQDVQRAAEIQAQFDAALQASIFADRDAFIAALLDEETFN
RLEQLKQSLEGQQQQAQTLVNQAQQALAAHQQQQPTEVDLTLTAQHLHDALAQLTQLLRD
NTTRQGEIRQQLKQDAENRQQQQALMQEIEKVAQQVEDWGYLNALIGSKEGDKFRKFAQG
LTLDNLVWLANNQLTRLHGRYLLQRKASEALELEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNATGKTIGVISHVEAMK
ERIPVQIKVKKINGLGYSKLDKMFAVE
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcctgaaaaacctcaactccctgaagggagaatggaaagtc
gatttcacggcagaaccttttgccagcaacgggctgttcgccatcaccgggcccacaggc
gcggggaaaaccaccctgctggacgcaatttgccttgcgctgtaccacgaaacgccgcgc
ctgaatactgtgtcacagtcgcaaaatgacctgatgacccgcgacacagcggagtgtctg
gccgaggtggaatttgaggtgcggggcgaagcctaccgcgcattctggagccagaaccgg
gcacgcaaccagcctgagggcaacctgcaggtcccgcgcgtagagctggcccgctgcgcc
gacggtaaaatcctcgccgataaagtcaaagacaagctggagatgaccgccgagcttacc
gggctggattacggccgttttacccgctcgatgctgctctctcagggccagtttgccgca
tttcttaatgccaaaccaaaagagcgcgccgaactgctggaagagctgaccggcacagag
atttacggtcaaatctccgctatggtgtttgaaaagcacaaatcagcgcgtacggagctg
gaaaaactgcaggcccaggccagcggcgtggcgctgttagcgccagagcaggtgcactct
ctgacagaaagtttgcaggtacttactgacgaagaaaaacaataccttaccagccaacaa
acccagcaacagcacctcaactggctcattcggcaaaatgagctacaaacggatataaac
catcaccagcaggcattacaggcagcacttcaggcgcaagaagacgcgcagccgcagttg
gcggcactgagtctggcactgccggccagggcgttacgcccgcactgggagcgaattcag
gaacaaacggctactatcgagcgtacgcgccagaagattcaggaagtgaatgctcgctta
caaagcagcttaacgctgcgcgggcgtattcgtcagcaggcgcaaatgcagtcgaccttg
atgctagccgaacaacagacgttaaccgactggcttaatgagcatgatcgcttccgctta
tggagtagcgaactggcaggatggaaagcgctgctggcccaacagtccgacgccagcacc
cagctacgccaatggcagcagctgcgagagaacgacacacgtaagctcaatgcactaacg
cttcccgcgctgaccctttcgccgcaggaggtaacggatgcgctggcgcaacatgtgcag
cttcgtccattacgccagcggctgagcaatttacacggacaaatcaccccgaagcaaaaa
caactggcacagttacgcgccacgcttgtacagcgtcaacaagagttgacccagcgcaac
gcggtgcttgccgaaaaacgtcagcgctataaagataaaaatcagcaacttaccgatgtg
agagtcatttgcgagcaagaagcccgcatcaaagatctggaaagccaacgggcattgttg
caatccggcatgccttgcccgctatgcggctccaccgcacatccggcgattgaacgctat
caaacgctcgaactgagcgtgaatcagacgcggcgtgaggcactggaaaaagaggtcaaa
acactggccgatgagggttcaacgttacgcggccagcttgaggcgataacccagcaactt
cagcgggatgaacgcgaagcagagacgctttctcaggaggagcaagcacttactcaagaa
tggctgaccgtcaccgccagcctcaacgtcacgctgcaaccgcaggatgacattgccccg
tggctggccgctcaggaagagcacgaacaacagcttcaccagttgagcctgcgtcatacc
ctgcaggcgcaaatcaccgcgcataccgagcagattacccagctccagttgcatattgac
cagcgccaggcgacgctaaccgccgagctttcccgttatggtctggcccttccgcccgag
gatgacgtcgcctcatggctaagcgaacgggcgaacgaagcacaaatgtggcaacagcgt
cagaatgaactgaccgagttacaggcccggattgcccagcttgcgccgctgctggaaacg
ttgcctgaaaccgaggcgctttctgaaaacattgaggatttgtcgctggaaaactggcgg
caggtgcacgacgattgcctctctttacagggacagtggcaaaccttgcaacagcaggag
gcgcaggacgttcagcgcgccgcggaaatccaggcgcagtttgatgccgcattgcaggcc
agcatctttgccgatcgcgacgcctttattgccgccctgctggacgaagagacctttaat
cgcctggagcagttgaagcaatcactggaaggccagcaacagcaggcgcaaacgctggtt
aatcaggcccagcaggcactggcggctcatcaacagcagcaaccaacagaagtggatctc
acgctgacggcgcagcatctgcacgacgcgctggcgcagctcacccaactgctacgcgat
aacactactcgtcagggcgaaattcgccagcagctcaaacaagatgctgaaaaccgccag
cagcagcaggcgctgatgcaggagattgaaaaagtcgcgcagcaggtcgaagactggggg
tatttgaatgcgctgatcggctcgaaagagggagataagttccgcaaatttgcccagggg
ctgacgctggataacctcgtctggcttgccaacaaccagttaacccgtctgcacggtcgc
tatttgttgcagcgcaaggccagcgaagcgttagagctggaagtggttgatacctggcag
gccgatgccgtacgtgatacgcgtacgctttccggcggcgagagcttcctcgtgagtctg
gcgctggcgctggcgttgtccgatctggtcagccacaaaacgcgaattgactccctgttc
ctcgacgaaggtttcggcacgctggacagtgaaacgctggataccgccctggacgcgctt
gatgcgctcaacgctaccggtaaaaccattggcgtgatcagccacgtcgaagcaatgaaa
gaacgcattccggtgcagatcaaagtgaaaaaaatcaacggtctgggctacagcaaactc
gacaaaatgtttgcggtggagtaa
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