Citrobacter sp. LUTT5: GUC46_19295
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Entry
GUC46_19295 CDS
T10487
Symbol
ldcC
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
citr Citrobacter sp. LUTT5
Pathway
citr00310
Lysine degradation
citr01100
Metabolic pathways
citr01110
Biosynthesis of secondary metabolites
citr01120
Microbial metabolism in diverse environments
Module
citr_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
citr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
GUC46_19295 (ldcC)
Enzymes [BR:
citr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
GUC46_19295 (ldcC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
PKcGMP_CC
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QHI84339
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Position
complement(3995872..3998010)
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AA seq
712 aa
AA seq
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MNIIAIMGPHGVFYKDEPIKELERALQQQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLELCSDINQLNEYLPLYAFINTHSTMDVSAHDLRMALWFFEYALGQSEDIATRIRQY
TSEYLDNITPPFTKALFTYVKEGKYTFCTPGHMAGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPAGSTLLI
DRNCHKSLAHLLMMSDVVPIWLKPTRNALGILGGIPRREFTHASIERKVEETNQAQWPVH
AVITNSTYDGLLYNTNWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIF
ETQSTHKMLAALSQASLIHIKGDYDEDTFNEAFMMHTSTSPSYPIVASIETAAAMLRGNS
GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPEKVDEAECWPVAPGEDWHGFVDAD
ADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTRAMGLLRGLTEFKRSYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHQLIRQH
DLSGLMLRAFDTLPEMKMTPHQAWQRQIKGEVETVALDQLVGRVSANMILPYPPGVPLLM
PGEMITAKSRAVLDFLLMLCSVGQRYPGFETDIHGAKLGEDGLYRVRVLKMA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcattgccatcatgggaccgcatggcgtcttttataaagatgagcccatcaag
gaacttgaacgtgcgctgcagcagcaggggtttcagattatctggccgcagaatagcgtc
gacctgctgaagtttatcgaacataacccgcgaatttgcggcgtcatttttgactgggat
gaatacagtctggaactgtgcagcgacatcaaccagctcaacgagtatctcccgctctac
gcctttattaatacccattcgacgatggatgtcagtgcgcacgacctgcgcatggcgctg
tggttttttgagtatgcgctgggtcagtctgaagacattgccacccgtatccgccagtac
accagcgaatacctcgataacatcacgcctccttttaccaaagcgctgtttacctatgtg
aaggaagggaagtataccttctgcacgcctgggcacatggcgggaacggcgtaccagaaa
agtccggtcggctgcctgttctatgatttctttggcggcaatacgctgaaagccgacgtg
tccatttccgtaaccgaactgggctcattgcttgatcataccggtccgcacctggaagcg
gaggagtatatcgcgcgtacttttggtgccgagcagagctatatggtgaccaacggcacc
tcgacatcgaacaagattgtcggtatgtatgctgcacctgcaggcagtacgctcctgatt
gaccgcaactgccataagtcactggcgcatttgctgatgatgagtgatgtggtgccaatc
tggctgaagcctacgcgtaacgcgctggggatcctcggcggtataccccgtcgggaattt
acccacgcaagcattgaacgcaaagttgaggaaaccaatcaggcgcaatggccggtccac
gcggtgatcaccaactccacctatgatggcctgttgtataacaccaactggatcaaacaa
accctggatgtgccctccatccattttgattcagcctgggtgccgtatacccattttcat
ccgatctatcaggggaaaagcgggatgagcggcgaacgggtaccgggaaaggtgattttt
gaaacccagtctacccacaagatgctggcggcgttgtcacaggcttcgctgatccacatt
aagggcgactatgatgaagacacgttcaacgaagcctttatgatgcacacctctacgtct
ccgagctatccgatagtggcgtcgatagaaacggcggcggcaatgctgcgtggcaattca
ggcaagcggttaatcaatcgttcggtggaacgggcgctgcatttccgtaaagaagtgcaa
cgtctgcgtgaagagtcggatggctggttctttgatatctggcagccggaaaaggtagat
gaagcagagtgctggccggtagcgccaggtgaagactggcacggatttgttgatgctgat
gccgaccacatgttccttgacccggtgaaggtcacgattttgacgccgggaatggatgaa
cagggaaatatgagcgaagaggggatccccgcggcgctggtggcgaaattccttgatgaa
cgcggcgtcgtagtcgagaagacgggaccgtataacctgttgttcctgttcagcattggt
attgataaaacccgggcgatggggctgctacgtggcctgacggaatttaagcgctcgtac
gatctgaatttacgtgtgaaaaatatgctgccggatctatatgctgaagatcccgatttc
tatcgcaatatgcgtattcaggatctggcgcaagggatccatcagttgatccgccagcat
gatctctccgggttgatgctgcgggcatttgataccttgccggaaatgaaaatgacgccg
caccaggcctggcagcggcagatcaaaggtgaggtcgaaacggtagcacttgatcaactg
gtggggcgcgtttctgccaatatgatcctgccttatccccccggtgtgccgcttttgatg
cccggggaaatgatcactgccaaaagccgggctgtcctcgattttcttctgatgctgtgc
tcggtagggcagcgctaccctggatttgaaaccgatatccatggcgctaaactgggcgag
gatggcctgtatcgcgtgagagtcttaaaaatggcataa
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